Conservation of cofitness between Xcc-8004.5193.1 and Xcc-8004.4948.1 in Xanthomonas campestris pv. campestris strain 8004

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor 1.0 Xcc-8004.4948.1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.55 3
Lysobacter sp. OAE881 0.47 ABIE51_RS01235 autotransporter assembly complex family protein 0.61 ABIE51_RS03265 trypsin-like peptidase domain-containing protein low > 62
Rhodanobacter denitrificans MT42 0.23 LRK55_RS12405 autotransporter assembly complex family protein 0.41 LRK55_RS06175 Do family serine endopeptidase low > 63
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS19705 autotransporter assembly complex family protein 0.46 ABZR86_RS17545 DegQ family serine endoprotease low > 74
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS12665 autotransporter assembly complex protein TamA 0.41 LRK54_RS06430 Do family serine endopeptidase low > 59
Serratia liquefaciens MT49 0.20 IAI46_01770 outer membrane protein assembly factor 0.36 IAI46_22390 serine endoprotease DegQ low > 86
Rahnella sp. WP5 0.19 EX31_RS08695 outer membrane protein assembly factor 0.36 EX31_RS12475 Do family serine endopeptidase low > 89
Klebsiella michiganensis M5al 0.19 BWI76_RS02775 outer membrane protein assembly factor 0.35 BWI76_RS25365 serine endoprotease DegQ low > 92
Pectobacterium carotovorum WPP14 0.19 HER17_RS03980 autotransporter assembly complex protein TamA 0.36 HER17_RS19985 serine endoprotease DegQ low > 75
Enterobacter asburiae PDN3 0.18 EX28DRAFT_3406 Outer membrane protein 0.36 EX28DRAFT_3283 periplasmic serine protease, Do/DeqQ family low > 76
Pantoea sp. MT58 0.18 IAI47_02715 outer membrane protein assembly factor 0.38 IAI47_17260 serine endoprotease DegQ low > 76
Enterobacter sp. TBS_079 0.18 MPMX20_00503 Translocation and assembly module subunit TamA 0.36 MPMX20_04138 Periplasmic pH-dependent serine endoprotease DegQ low > 85
Escherichia fergusonii Becca 0.18 EFB2_04309 Translocation and assembly module subunit TamA 0.35 EFB2_03883 Periplasmic serine endoprotease DegP low > 86
Escherichia coli Nissle 1917 0.18 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.35 ECOLIN_RS00895 serine endoprotease DegP low > 55
Escherichia coli BW25113 0.18 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 0.35 b0161 degP serine endoprotease (protease Do), membrane-associated (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_03813 Translocation and assembly module subunit TamA 0.35 OHPLBJKB_03501 Periplasmic serine endoprotease DegP low > 73
Escherichia coli ECRC99 0.18 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 0.35 KEDOAH_17900 degP serine endoprotease DegP — —
Escherichia coli ECRC98 0.18 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 0.35 JDDGAC_13850 degP serine endoprotease DegP low > 86
Escherichia coli ECRC102 0.18 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 0.35 NIAGMN_08105 degP serine endoprotease DegP — —
Escherichia coli ECRC62 0.18 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.35 BNILDI_09070 degP serine endoprotease DegP low > 75
Escherichia coli BL21 0.18 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 0.35 ECD_00160 serine endoprotease (protease Do), membrane-associated low > 61
Escherichia coli ECRC100 0.18 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 0.35 OKFHMN_10255 degP serine endoprotease DegP low > 80
Escherichia coli ECOR27 0.18 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.35 NOLOHH_02600 degP serine endoprotease DegP low > 75
Escherichia coli ECRC101 0.18 MCAODC_02515 tamA autotransporter assembly complex protein TamA 0.35 MCAODC_00770 degP serine endoprotease DegP low > 87
Escherichia coli ECOR38 0.18 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.35 HEPCGN_08205 degP serine endoprotease DegP low > 87
Dickeya dadantii 3937 0.18 DDA3937_RS17160 outer membrane protein assembly factor 0.36 DDA3937_RS01605 serine endoprotease DegQ low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF874 Uncharacterized protein YtfM precursor 0.35 GFF2974 Outer membrane stress sensor protease DegQ, serine protease low > 78
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_12905 outer membrane protein assembly factor 0.36 CSW01_03020 serine endoprotease DegQ low > 62
Erwinia tracheiphila SCR3 0.17 LU632_RS02105 autotransporter assembly complex protein TamA 0.36 LU632_RS21355 Do family serine endopeptidase low > 74
Shewanella loihica PV-4 0.17 Shew_2172 surface antigen (D15) (RefSeq) 0.37 Shew_3296 protease Do (RefSeq) — —
Dickeya dianthicola 67-19 0.17 HGI48_RS17215 outer membrane protein assembly factor 0.36 HGI48_RS01520 serine endoprotease DegQ low > 71
Dickeya dianthicola ME23 0.17 DZA65_RS18295 outer membrane protein assembly factor 0.36 DZA65_RS01585 serine endoprotease DegQ low > 75
Alteromonas macleodii MIT1002 0.16 MIT1002_04048 Autotransporter assembly factor TamA 0.36 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor low > 70
Shewanella sp. ANA-3 0.15 Shewana3_1894 surface antigen (D15) (RefSeq) 0.37 Shewana3_0690 peptidase Do (RefSeq) low > 73
Shewanella oneidensis MR-1 0.15 SO2114 conserved hypothetical protein (NCBI ptt file) 0.37 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.15 Sama_1616 hypothetical protein (RefSeq) 0.39 Sama_3073 serine protease (RefSeq) 0.40 52
Brevundimonas sp. GW460-12-10-14-LB2 0.07 A4249_RS02875 autotransporter assembly complex family protein 0.23 A4249_RS07900 Do family serine endopeptidase low > 48

Not shown: 31 genomes with orthologs for Xcc-8004.5193.1 only; 6 genomes with orthologs for Xcc-8004.4948.1 only