Conservation of cofitness between Xcc-8004.3403.1 and Xcc-8004.3537.1 in Xanthomonas campestris pv. campestris strain 8004

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3403.1 Fumarate hydratase class II (EC 4.2.1.2) 1.0 Xcc-8004.3537.1 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.42 17
Lysobacter sp. OAE881 0.77 ABIE51_RS09015 class II fumarate hydratase 0.77 ABIE51_RS07005 asparagine synthase B low > 62
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_06345 aspA aspartate ammonia-lyase 0.73 OKGIIK_07005 asnB asparagine synthase B low > 52
Rhodanobacter denitrificans MT42 0.70 LRK55_RS00660 class II fumarate hydratase 0.73 LRK55_RS18205 asparagine synthase B low > 63
Rhodanobacter denitrificans FW104-10B01 0.70 LRK54_RS00885 class II fumarate hydratase 0.73 LRK54_RS00305 asparagine synthase B low > 59
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS05855 class II fumarate hydratase 0.72 ABZR86_RS02815 asparagine synthase B low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_07895 class II fumarate hydratase 0.61 CSW01_05055 asparagine synthase B low > 62
Shewanella amazonensis SB2B 0.56 Sama_0822 fumarate hydratase (RefSeq) 0.63 Sama_2101 asnB asparagine synthetase B (RefSeq) low > 62
Shewanella loihica PV-4 0.55 Shew_0068 fumarate lyase (RefSeq) 0.62 Shew_1509 asnB asparagine synthetase B (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.53 MIT1002_03167 Fumarate hydratase class II 0.58 MIT1002_01266 Asparagine synthetase B [glutamine-hydrolyzing] low > 70
Escherichia coli Nissle 1917 0.46 ECOLIN_RS08995 class II fumarate hydratase 0.59 ECOLIN_RS03600 asparagine synthase B — —
Escherichia fergusonii Becca 0.46 EFB2_02381 Fumarate hydratase class II 0.59 EFB2_03429 Asparagine synthetase B [glutamine-hydrolyzing] low > 86
Escherichia coli ECOR27 0.46 NOLOHH_18155 fumC class II fumarate hydratase 0.59 NOLOHH_23560 asnB asparagine synthase B low > 75
Escherichia coli ECOR38 0.46 HEPCGN_06025 fumC class II fumarate hydratase 0.59 HEPCGN_01050 asnB asparagine synthase B low > 87
Escherichia coli BL21 0.46 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II 0.59 ECD_00631 asparagine synthetase B — —
Escherichia coli ECRC102 0.45 NIAGMN_00425 fumC class II fumarate hydratase 0.59 NIAGMN_05235 asnB asparagine synthase B — —
Escherichia coli ECRC101 0.45 MCAODC_17760 fumC class II fumarate hydratase 0.59 MCAODC_26395 asnB asparagine synthase B low > 87
Escherichia coli ECRC98 0.45 JDDGAC_02240 fumC class II fumarate hydratase 0.59 JDDGAC_10830 asnB asparagine synthase B low > 86
Escherichia coli ECRC62 0.45 BNILDI_16945 fumC class II fumarate hydratase 0.59 BNILDI_21565 asnB asparagine synthase B low > 75
Escherichia coli ECRC100 0.45 OKFHMN_27650 fumC class II fumarate hydratase 0.59 OKFHMN_07180 asnB asparagine synthase B low > 80
Escherichia coli BW25113 0.45 b1611 fumC fumarate hydratase (NCBI) 0.59 b0674 asnB asparagine synthetase B (NCBI) low > 76
Escherichia coli ECRC99 0.45 KEDOAH_00455 fumC class II fumarate hydratase 0.59 KEDOAH_20790 asnB asparagine synthase B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02115 Fumarate hydratase class II 0.59 OHPLBJKB_03042 Asparagine synthetase B [glutamine-hydrolyzing] low > 73
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) 0.59 EX28DRAFT_2301 asparagine synthase (glutamine-hydrolyzing) low > 76
Klebsiella michiganensis M5al 0.44 BWI76_RS16270 fumarate hydratase, class II 0.59 BWI76_RS08180 asparagine synthase B low > 92
Serratia liquefaciens MT49 0.44 IAI46_11655 class II fumarate hydratase 0.58 IAI46_06065 asparagine synthase B low > 86
Rahnella sp. WP5 0.44 EX31_RS06965 class II fumarate hydratase 0.58 EX31_RS23245 asparagine synthase B low > 89
Enterobacter sp. TBS_079 0.44 MPMX20_02022 Fumarate hydratase class II 0.59 MPMX20_01320 Asparagine synthetase B [glutamine-hydrolyzing] low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) 0.59 GFF4582 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 78
Pantoea sp. MT58 0.43 IAI47_10335 class II fumarate hydratase 0.60 IAI47_13900 asparagine synthase B low > 76
Erwinia tracheiphila SCR3 0.43 LU632_RS12335 fumC class II fumarate hydratase 0.59 LU632_RS16265 asnB asparagine synthase B — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS10755 class II fumarate hydratase 0.59 HER17_RS15120 asparagine synthase B low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS10655 class II fumarate hydratase 0.59 HGI48_RS06340 asparagine synthase B low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS11125 class II fumarate hydratase 0.59 DZA65_RS06685 asparagine synthase B low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) 0.50 GFF1173 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 90
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS20055 aspartate ammonia-lyase 0.59 ABI39_RS20695 asparagine synthase B low > 72
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS06295 aspartate ammonia-lyase 0.59 HMPREF1058_RS06930 asparagine synthase B low > 67
Bacteroides ovatus ATCC 8483 0.33 BACOVA_01069 aspartate ammonia-lyase 0.58 BACOVA_03758 asparagine synthase (glutamine-hydrolyzing) low > 94
Bacteroides thetaiotaomicron VPI-5482 0.32 BT2755 aspartate ammonia-lyase (NCBI ptt file) 0.59 BT0551 asparagine synthetase B [glutamine-hydrolyzing] (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS11250 aspartate ammonia-lyase 0.58 HMPREF1181_RS16045 asparagine synthase B low > 56

Not shown: 58 genomes with orthologs for Xcc-8004.3403.1 only; 5 genomes with orthologs for Xcc-8004.3537.1 only