Conservation of cofitness between Xcc-8004.4982.1 and Xcc-8004.3082.1 in Xanthomonas campestris pv. campestris strain 8004

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4982.1 Protein yjbJ 1.0 Xcc-8004.3082.1 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 0.34 17
Lysobacter sp. OAE881 0.81 ABIE51_RS04000 CsbD family protein 0.28 ABIE51_RS10900 2-dehydro-3-deoxygalactonokinase low > 62
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_14015 yjbJ CsbD family protein 0.29 OKGIIK_12500 2-keto-3-deoxy-galactonokinase low > 52
Pantoea sp. MT58 0.55 IAI47_21375 CsbD family protein 0.23 IAI47_00035 2-dehydro-3-deoxygalactonokinase low > 76
Paraburkholderia graminis OAS925 0.51 ABIE53_003029 uncharacterized protein YjbJ (UPF0337 family) 0.27 ABIE53_003557 2-dehydro-3-deoxygalactonokinase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04369 Uncharacterized conserved protein YjbJ, UPF0337 family 0.29 H281DRAFT_06294 2-keto-3-deoxygalactonate kinase (EC 2.7.1.58) low > 103
Enterobacter sp. TBS_079 0.49 MPMX20_00261 hypothetical protein 0.22 MPMX20_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 low > 85
Dinoroseobacter shibae DFL-12 0.49 Dshi_4184 CsbD family protein (RefSeq) 0.25 Dshi_1242 2-dehydro-3-deoxygalactonokinase (RefSeq) — —
Serratia liquefaciens MT49 0.48 IAI46_22995 CsbD family protein 0.28 IAI46_03175 2-dehydro-3-deoxygalactonokinase low > 86
Variovorax sp. OAS795 0.47 ABID97_RS10585 CsbD family protein 0.42 ABID97_RS21210 2-dehydro-3-deoxygalactonokinase — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS23345 CsbD family protein 0.25 ECOLIN_RS22100 2-dehydro-3-deoxygalactonokinase low > 55
Variovorax sp. SCN45 0.47 GFF2871 UPF0337 protein YjbJ 0.42 GFF6771 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) — —
Escherichia coli ECOR38 0.47 HEPCGN_11575 yjbJ UPF0337 protein YjbJ 0.23 HEPCGN_13765 dgoK 2-dehydro-3-deoxygalactonokinase low > 87
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS04645 CsbD family protein 0.29 QEN71_RS27110 2-dehydro-3-deoxygalactonokinase low > 153
Escherichia fergusonii Becca 0.47 EFB2_04558 hypothetical protein 0.25 EFB2_04785 putative 2-dehydro-3-deoxygalactonokinase DgoK1 low > 86
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4267 Uncharacterized protein conserved in bacteria 0.23 EX28DRAFT_3981 2-keto-3-deoxy-galactonokinase low > 76
Klebsiella michiganensis M5al 0.47 BWI76_RS01885 CsbD family protein 0.27 BWI76_RS27945 2-oxo-3-deoxygalactonate kinase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1415 UPF0337 protein yjbJ 0.23 GFF1763 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) low > 78
Rahnella sp. WP5 0.46 EX31_RS11855 CsbD family protein 0.25 EX31_RS10330 2-dehydro-3-deoxygalactonokinase low > 89
Escherichia coli BL21 0.45 ECD_03917 stress-induced protein, UPF0337 family 0.25 ECD_03723 hypothetical protein low > 61
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS06000 hypothetical protein 0.30 HSERO_RS05160 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) (from data) — —
Escherichia coli ECOR27 0.45 NOLOHH_05210 yjbJ UPF0337 protein YjbJ 0.24 NOLOHH_07200 dgoK 2-dehydro-3-deoxygalactonokinase low > 75
Escherichia coli ECRC62 0.45 BNILDI_06310 yjbJ UPF0337 protein YjbJ 0.24 BNILDI_04330 dgoK 2-dehydro-3-deoxygalactonokinase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03998 hypothetical protein 0.24 OHPLBJKB_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 low > 73
Escherichia coli BW25113 0.45 b4045 yjbJ predicted stress response protein (NCBI) 0.24 b3693 dgoK 2-oxo-3-deoxygalactonate kinase (NCBI) low > 76
Rhizobium sp. OAE497 0.45 ABIE40_RS26785 CsbD family protein 0.25 ABIE40_RS05270 2-dehydro-3-deoxygalactonokinase low > 107
Agrobacterium fabrum C58 0.43 Atu4724 hypothetical protein 0.26 Atu5456 hypothetical protein low > 89
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2163 UPF0337 protein yjbJ 0.29 Ac3H11_602 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS14335 hypothetical protein 0.31 BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) — —
Sinorhizobium meliloti 1021 0.40 SM_b21330 hypothetical protein 0.27 SMc00881 2-dehydro-3-deoxygalactonokinase low > 103
Phaeobacter inhibens DSM 17395 0.39 PGA1_c27000 Uncharacterized protein conserved in bacteria 0.27 PGA1_c07360 2-dehydro-3-deoxygalactonokinase DgoK low > 62

Not shown: 12 genomes with orthologs for Xcc-8004.4982.1 only; 20 genomes with orthologs for Xcc-8004.3082.1 only