Conservation of cofitness between TX73_012725 and TX73_003470 in Rhodopseudomonas palustris CGA009

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_012725 anhydro-N-acetylmuramic acid kinase 1.0 TX73_003470 4-hydroxybenzoyl-CoA reductase subunit gamma 0.65 5
Sinorhizobium meliloti 1021 0.43 SMc00527 anhydro-N-acetylmuramic acid kinase 0.52 SM_b20131 oxidoreductase low > 103
Agrobacterium fabrum C58 0.42 Atu1827 hypothetical protein 0.41 Atu5498 oxidoreductase with iron-sulfur subunit low > 89
Magnetospirillum magneticum AMB-1 0.41 AMB_RS15285 anhydro-N-acetylmuramic acid kinase 0.61 AMB_RS10195 4-hydroxybenzoyl-CoA reductase subunit gamma low > 64
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.37 Pf6N2E2_5938 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) low > 103
Pseudomonas fluorescens SBW25 0.27 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.39 PFLU_RS13670 (2Fe-2S)-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.39 PFLU_RS13670 (2Fe-2S)-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2562 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.40 Pf1N1B4_4583 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) — —
Pseudomonas putida KT2440 0.27 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.40 PP_3947 nicotinate dehydrogenase subunit A low > 96
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_14500 anhydro-N-acetylmuramic acid kinase 0.42 AO356_26655 (2Fe-2S)-binding protein low > 104
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1235 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.39 PfGW456L13_3353 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) — —
Pseudomonas sp. S08-1 0.26 OH686_15205 Anhydro-N-acetylmuramic acid kinase 0.34 OH686_18540 isoquinoline 1-oxidoreductase subunit alpha low > 80
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_07145 anhydro-N-acetylmuramic acid kinase 0.38 AO353_23430 (2Fe-2S)-binding protein low > 101
Pseudomonas simiae WCS417 0.26 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.38 PS417_13030 (2Fe-2S)-binding protein — —
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase 0.38 HSERO_RS06620 (2Fe-2S)-binding protein low > 78
Shewanella amazonensis SB2B 0.25 Sama_0848 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.34 Sama_3438 isoquinoline 1-oxidoreductase, alpha subunit, putative (RefSeq) low > 62
Escherichia coli ECRC62 0.25 BNILDI_16795 anmK anhydro-N-acetylmuramic acid kinase 0.36 BNILDI_10155 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC low > 75
Escherichia coli ECOR38 0.25 HEPCGN_05870 anmK anhydro-N-acetylmuramic acid kinase 0.36 HEPCGN_18990 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC low > 87
Escherichia coli ECRC101 0.25 MCAODC_17925 anmK anhydro-N-acetylmuramic acid kinase 0.36 MCAODC_10225 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC low > 87
Shewanella sp. ANA-3 0.25 Shewana3_3060 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.35 Shewana3_1496 2Fe-2S iron-sulfur cluster binding domain-containing protein (RefSeq) low > 73
Serratia liquefaciens MT49 0.25 IAI46_11350 anhydro-N-acetylmuramic acid kinase 0.42 IAI46_11840 (2Fe-2S)-binding protein low > 86
Escherichia coli ECRC102 0.25 NIAGMN_00580 anmK anhydro-N-acetylmuramic acid kinase 0.36 NIAGMN_17470 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC — —
Escherichia coli ECRC100 0.25 OKFHMN_27485 anmK anhydro-N-acetylmuramic acid kinase 0.36 OKFHMN_19700 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC low > 80
Escherichia coli BW25113 0.25 b1640 ydhH anhydro-N-acetylmuramic acid kinase (NCBI) 0.36 b2868 xdhC xanthine dehydrogenase, Fe-S binding subunit (NCBI) low > 76
Escherichia coli ECRC98 0.25 JDDGAC_02075 anmK anhydro-N-acetylmuramic acid kinase 0.36 JDDGAC_23345 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC low > 86
Escherichia coli ECRC99 0.25 KEDOAH_00620 anmK anhydro-N-acetylmuramic acid kinase 0.36 KEDOAH_08430 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC — —
Escherichia coli BL21 0.25 ECD_01610 anhydro-N-acetylmuramic acid kinase 0.36 ECD_02701 xanthine dehydrogenase, Fe-S binding subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_02085 Anhydro-N-acetylmuramic acid kinase 0.36 OHPLBJKB_00847 Nicotinate dehydrogenase small FeS subunit low > 73
Escherichia coli ECOR27 0.25 NOLOHH_18005 anmK anhydro-N-acetylmuramic acid kinase 0.37 NOLOHH_11630 xdhB xanthine dehydrogenase FAD-binding subunit XdhB low > 75
Escherichia fergusonii Becca 0.25 EFB2_02352 Anhydro-N-acetylmuramic acid kinase 0.36 EFB2_01033 Nicotinate dehydrogenase small FeS subunit low > 86
Escherichia coli Nissle 1917 0.25 ECOLIN_RS09150 anhydro-N-acetylmuramic acid kinase 0.36 ECOLIN_RS15990 xanthine dehydrogenase iron sulfur-binding subunit XdhC — —
Klebsiella michiganensis M5al 0.24 BWI76_RS16420 anhydro-N-acetylmuramic acid kinase 0.45 BWI76_RS17570 iron-sulfur-binding protein low > 92
Shewanella oneidensis MR-1 0.24 SO1313 conserved hypothetical protein (NCBI ptt file) 0.35 SO3049 isoquinoline 1-oxidoreductase, alpha subunit, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.24 Shew_1020 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.36 Shew_2266 2Fe-2S iron-sulfur cluster binding domain-containing protein (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS02660 anhydro-N-acetylmuramic acid kinase 0.45 RR42_RS13620 ferredoxin low > 128

Not shown: 52 genomes with orthologs for TX73_012725 only; 2 genomes with orthologs for TX73_003470 only