Conservation of cofitness between SMc02558 and SMc01275 in Sinorhizobium meliloti 1021

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02558 hypothetical protein 1.0 SMc01275 ribosomal large subunit pseudouridine synthase C protein 0.75 3
Rhizobium sp. OAE497 0.57 ABIE40_RS06145 folate-binding protein YgfZ 0.81 ABIE40_RS09915 RluA family pseudouridine synthase low > 107
Agrobacterium fabrum C58 0.49 Atu1053 glycine cleavage system T protein, aminomethyltransferase 0.81 Atu1471 ribosomal large subunit pseudouridine synthase C — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_2092 glycine cleavage T protein (aminomethyl transferase) (RefSeq) 0.38 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) low > 64
Azospirillum brasilense Sp245 0.23 AZOBR_RS06940 glycine cleavage system protein T 0.44 AZOBR_RS06905 pseudouridine synthase low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS09495 folate-binding protein YgfZ 0.37 A4249_RS07865 RluA family pseudouridine synthase — —
Caulobacter crescentus NA1000 0.22 CCNA_00389 aminomethyltransferase family protein 0.39 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_00389 aminomethyltransferase family protein 0.39 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Azospirillum sp. SherDot2 0.22 MPMX19_01714 tRNA-modifying protein YgfZ 0.43 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C low > 112
Phaeobacter inhibens DSM 17395 0.22 PGA1_c23960 tRNA-modifying protein ygfZ-like protein 0.41 PGA1_c01950 ribosomal large subunit pseudouridine synthase C — —
Rhodospirillum rubrum S1H 0.17 Rru_A2940 Glycine cleavage T protein (aminomethyl transferase) (NCBI) 0.42 Rru_A2659 Pseudouridine synthase, RluD (NCBI) — —
Kangiella aquimarina DSM 16071 0.14 B158DRAFT_2176 folate-binding protein YgfZ 0.26 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) — —
Escherichia coli ECOR38 0.14 HEPCGN_18840 ygfZ tRNA-modifying protein YgfZ 0.25 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR27 0.14 NOLOHH_11475 ygfZ tRNA-modifying protein YgfZ 0.25 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BW25113 0.13 b2898 ygfZ putative global regulator (NCBI) 0.25 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) — —
Escherichia coli Nissle 1917 0.13 ECOLIN_RS16145 tRNA-modifying protein YgfZ 0.25 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC62 0.13 BNILDI_10005 ygfZ tRNA-modifying protein YgfZ 0.25 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BL21 0.13 ECD_02730 iron-sulfur cluster repair protein, plumbagin resistance 0.25 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase — —
Escherichia fergusonii Becca 0.13 EFB2_01003 tRNA-modifying protein YgfZ 0.25 EFB2_02889 Ribosomal large subunit pseudouridine synthase C — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_00817 tRNA-modifying protein YgfZ 0.25 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C — —
Shewanella amazonensis SB2B 0.13 Sama_2950 hypothetical protein (RefSeq) 0.25 Sama_1988 pseudouridylate synthase (RefSeq) — —
Escherichia coli ECRC102 0.13 NIAGMN_17315 ygfZ tRNA-modifying protein YgfZ 0.25 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC99 0.13 KEDOAH_08590 ygfZ tRNA-modifying protein YgfZ 0.25 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC101 0.13 OKFHMN_19550 ygfZ tRNA-modifying protein YgfZ 0.25 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC101 0.13 MCAODC_10070 ygfZ tRNA-modifying protein YgfZ 0.25 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC98 0.13 JDDGAC_23190 ygfZ tRNA-modifying protein YgfZ 0.25 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS10915 folate-binding protein 0.23 RR42_RS14155 pseudouridine synthase — —
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_4521 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 0.25 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF2996 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 0.25 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens SBW25 0.12 PFLU_RS07175 folate-binding protein YgfZ 0.25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS07175 folate-binding protein YgfZ 0.25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Marinobacter adhaerens HP15 0.11 HP15_771 glycine cleavage T-protein (aminomethyl transferase) 0.24 HP15_2221 pseudouridine synthase, RluA family low > 73
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_2762 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 0.25 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_04595 aminomethyltransferase 0.25 AO356_20125 23S rRNA pseudouridylate synthase — —
Lysobacter sp. OAE881 0.10 ABIE51_RS12540 folate-binding protein YgfZ 0.24 ABIE51_RS11800 RluA family pseudouridine synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.10 Xcc-8004.2453.1 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 0.24 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —

Not shown: 2 genomes with orthologs for SMc02558 only; 48 genomes with orthologs for SMc01275 only