Conservation of cofitness between RS_RS11185 and RS_RS25105 in Ralstonia solanacearum GMI1000

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia solanacearum GMI1000 1.0 RS_RS11185 dienelactone hydrolase family protein 1.0 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator 0.43 5
Ralstonia solanacearum PSI07 0.93 RPSI07_RS13490 dienelactone hydrolase family protein 0.98 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.93 RALBFv3_RS03740 dienelactone hydrolase family protein 0.97 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.93 UW163_RS09930 dienelactone hydrolase family protein 0.97 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.90 ABZR87_RS15670 dienelactone hydrolase family protein 0.90 ABZR87_RS23515 sigma-54 dependent transcriptional regulator low > 80
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS17895 dienelactone hydrolase family protein 0.73 QEN71_RS24790 sigma-54 dependent transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06020 carboxymethylenebutenolidase 0.73 H281DRAFT_00240 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_004854 carboxymethylenebutenolidase 0.73 ABIE53_001365 DNA-binding NtrC family response regulator low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS33600 carboxymethylenebutenolidase 0.73 BPHYT_RS05575 Fis family transcriptional regulator 0.51 2
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS02270 carboxymethylenebutenolidase 0.34 HSERO_RS23170 ATPase AAA low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF5583 Dienelactone hydrolase family 0.55 GFF3635 Nitrogen regulation protein NR(I) low > 90
Variovorax sp. OAS795 0.57 ABID97_RS09210 dienelactone hydrolase family protein 0.50 ABID97_RS11955 sigma-54 dependent transcriptional regulator low > 91
Dechlorosoma suillum PS 0.56 Dsui_0436 dienelactone hydrolase-like enzyme 0.34 Dsui_3286 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 51
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04221 Carboxymethylenebutenolidase 0.40 OHPLBJKB_01490 Regulatory protein AtoC low > 73
Escherichia coli BW25113 0.48 b3830 ysgA predicted hydrolase (NCBI) 0.40 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) low > 76
Escherichia coli ECRC100 0.48 OKFHMN_14320 ysgA Putative carboxymethylenebutenolidase 0.36 OKFHMN_13320 zraR sigma-54-dependent response regulator transcription factor ZraR low > 80
Escherichia coli ECRC101 0.48 MCAODC_04825 ysgA Putative carboxymethylenebutenolidase 0.36 MCAODC_03820 zraR sigma-54-dependent response regulator transcription factor ZraR low > 87
Escherichia coli ECRC98 0.48 JDDGAC_17945 ysgA Putative carboxymethylenebutenolidase 0.36 JDDGAC_16945 zraR sigma-54-dependent response regulator transcription factor ZraR low > 86
Escherichia coli ECRC102 0.48 NIAGMN_12075 ysgA Putative carboxymethylenebutenolidase 0.36 NIAGMN_11070 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECRC99 0.48 KEDOAH_13830 ysgA Putative carboxymethylenebutenolidase 0.36 KEDOAH_14840 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECOR38 0.48 HEPCGN_12990 ysgA Putative carboxymethylenebutenolidase 0.39 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC low > 87
Escherichia coli Nissle 1917 0.48 ECOLIN_RS22070 dienelactone hydrolase family protein 0.40 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC — —
Escherichia coli BL21 0.48 ECD_03717 putative carboxymethylenebutenolidase 0.40 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein low > 61
Escherichia coli ECRC62 0.48 BNILDI_05080 ysgA Putative carboxymethylenebutenolidase 0.37 BNILDI_06055 zraR sigma-54-dependent response regulator transcription factor ZraR low > 75
Escherichia coli ECOR27 0.47 NOLOHH_06450 ysgA Putative carboxymethylenebutenolidase 0.37 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR low > 75
Escherichia fergusonii Becca 0.47 EFB2_04791 Carboxymethylenebutenolidase 0.40 EFB2_01635 Regulatory protein AtoC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF257 Putative carboxymethylenebutenolidase (EC 3.1.1.45) 0.37 GFF4188 Response regulator of zinc sigma-54-dependent two-component system low > 78
Klebsiella michiganensis M5al 0.46 BWI76_RS01290 putative dienelactone hydrolase 0.34 BWI76_RS01605 transcriptional regulatory protein ZraR low > 92
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS13145 dienelactone hydrolase family protein 0.31 A4249_RS09115 sigma-54 dependent transcriptional regulator low > 48
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS16900 dienelactone hydrolase family protein 0.34 PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.19 PFLU_RS16900 dienelactone hydrolase family protein 0.34 PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_2534 Carboxymethylenebutenolidase 0.32 Psyr_0831 Two-component response regulator CbrB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_2534 Carboxymethylenebutenolidase 0.32 Psyr_0831 Two-component response regulator CbrB — —
Pseudomonas simiae WCS417 0.18 PS417_14885 dienelactone hydrolase 0.34 PS417_23895 Fis family transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_4241 Dienelactone hydrolase family 0.33 Pf1N1B4_2858 Two-component sensor CbrB: intrcellular carbon:nitrogen balance low > 87
Lysobacter sp. OAE881 0.16 ABIE51_RS12930 dienelactone hydrolase family protein 0.36 ABIE51_RS11765 sigma-54 dependent transcriptional regulator low > 62
Azospirillum sp. SherDot2 0.15 MPMX19_01721 hypothetical protein 0.36 MPMX19_03494 Regulatory protein AtoC low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS04740 carboxymethylenebutenolidase 0.33 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator 0.40 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.13 ABZR88_RS05710 dienelactone hydrolase family protein 0.34 ABZR88_RS12650 sigma-54 dependent transcriptional regulator low > 71

Not shown: 18 genomes with orthologs for RS_RS11185 only; 27 genomes with orthologs for RS_RS25105 only