Conservation of cofitness between RR42_RS17315 and RR42_RS35445 in Cupriavidus basilensis FW507-4G11

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) 1.0 RR42_RS35445 ArsR family transcriptional regulator 0.30 8
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS01150 glycolate oxidase subunit GlcF 0.55 ABZR87_RS14035 metalloregulator ArsR/SmtB family transcription factor low > 80
Ralstonia solanacearum PSI07 0.74 RPSI07_RS11800 glycolate oxidase iron-sulfur subunit 0.52 RPSI07_RS15365 ArsR family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS05500 glycolate oxidase iron-sulfur subunit 0.53 RALBFv3_RS02060 transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS08125 glycolate oxidase iron-sulfur subunit 0.53 UW163_RS15385 transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS19095 glycolate oxidase 0.43 HSERO_RS11595 ArsR family transcriptional regulator low > 78
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04681 glycolate oxidase iron-sulfur subunit 0.73 H281DRAFT_02691 transcriptional regulator, ArsR family low > 103
Pseudomonas stutzeri RCH2 0.56 Psest_3839 D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.59 Psest_1782 Predicted transcriptional regulators low > 67
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_5864 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF 0.57 Pf1N1B4_4483 Transcriptional regulator, ArsR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_21300 glycolate oxidase iron-sulfur subunit 0.57 AO353_26620 ArsR family transcriptional regulator low > 101
Escherichia coli ECRC62 0.54 BNILDI_00585 glcF glycolate oxidase subunit GlcF 0.31 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECOR27 0.54 NOLOHH_10930 glcF glycolate oxidase subunit GlcF 0.31 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV low > 57
Escherichia coli BL21 0.54 ECD_02846 glycolate oxidase 4Fe-4S iron-sulfur cluster subunit 0.31 ECD_02523 tributyltin-inducible repressor of ygaVP low > 60
Escherichia coli Nissle 1917 0.54 ECOLIN_RS17130 glycolate oxidase subunit GlcF 0.30 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00729 Lactate utilization protein A 0.31 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli BW25113 0.54 b4467 glcF glycolate oxidase iron-sulfur subunit (NCBI) 0.31 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia fergusonii Becca 0.54 EFB2_00837 Lactate utilization protein A 0.30 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli ECOR38 0.54 HEPCGN_18005 glcF glycolate oxidase subunit GlcF 0.31 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV low > 85
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_135 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF 0.24 Pf6N2E2_595 Arsenical resistance operon repressor low > 103
Sinorhizobium meliloti 1021 0.38 SMc00926 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) 0.46 SMa1056 transcriptional regulator low > 103
Agrobacterium fabrum C58 0.38 Atu0667 glycolate oxidase iron-sulfur subunit 0.50 Atu3466 ArsR family transcriptional regulator low > 89
Phaeobacter inhibens DSM 17395 0.37 PGA1_c29700 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) 0.42 PGA1_c12380 regulatory protein SoxR low > 62
Azospirillum brasilense Sp245 0.36 AZOBR_RS05735 2-hydroxy-acid oxidase 0.44 AZOBR_RS20775 ArsR family transcriptional regulator low > 97
Rhodopseudomonas palustris CGA009 0.36 TX73_005815 glycolate oxidase subunit GlcF 0.47 TX73_005240 metalloregulator ArsR/SmtB family transcription factor low > 86
Bosea sp. OAE506 0.35 ABIE41_RS22135 glycolate oxidase subunit GlcF 0.43 ABIE41_RS10070 sulfite-sensing transcriptional repressor BigR low > 77
Dinoroseobacter shibae DFL-12 0.35 Dshi_2894 protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq) 0.42 Dshi_2812 transcriptional regulator, ArsR family (RefSeq) low > 64

Not shown: 16 genomes with orthologs for RR42_RS17315 only; 28 genomes with orthologs for RR42_RS35445 only