Conservation of cofitness between RR42_RS17675 and RR42_RS30960 in Cupriavidus basilensis FW507-4G11

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS17675 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 RR42_RS30960 transcriptional regulator 0.49 9
Ralstonia solanacearum PSI07 0.79 RPSI07_RS11275 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.81 RPSI07_RS01875 DNA-binding response regulator low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS13915 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.81 RS_RS19510 DNA-binding response regulator low > 80
Ralstonia solanacearum UW163 0.78 UW163_RS07655 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.81 UW163_RS22425 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS05970 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.81 RALBFv3_RS21280 DNA-binding response regulator low > 76
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS01630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.82 ABZR87_RS21725 heavy metal response regulator transcription factor low > 80
Variovorax sp. SCN45 0.61 GFF4445 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) 0.64 GFF4069 DNA-binding heavy metal response regulator low > 127
Pseudomonas simiae WCS417 0.59 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.69 PS417_18460 transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.70 PFLU_RS20435 heavy metal response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.70 PFLU_RS20435 heavy metal response regulator transcription factor low > 109
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_05114 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.70 GEMAOFIL_03921 Transcriptional activator protein CzcR low > 93
Alteromonas macleodii MIT1002 0.59 MIT1002_00168 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.63 MIT1002_00247 Transcriptional regulatory protein CusR low > 70
Pseudomonas sp. RS175 0.59 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.62 PFR28_01134 Transcriptional activator protein CopR low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF583 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.62 GFF1120 DNA-binding heavy metal response regulator — —
Shewanella loihica PV-4 0.58 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.65 Shew_3258 two component heavy metal response transcriptional regulator (RefSeq) low > 60
Pseudomonas sp. S08-1 0.58 OH686_09400 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.64 OH686_22680 Copper-sensing two-component system response regulator CusR 0.67 36
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.62 Pf6N2E2_2266 Copper-sensing two-component system response regulator CusR low > 103
Shewanella oneidensis MR-1 0.58 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.40 SO4428 DNA-binding response regulator (NCBI ptt file) low > 76
Pseudomonas sp. DMC3 0.58 GFF3860 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.70 GFF4241 Transcriptional activator protein CzcR low > 89
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.69 AO353_28575 transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.66 PfGW456L13_4017 Copper-sensing two-component system response regulator CusR low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.62 AO356_02215 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.66 Pf1N1B4_67 Copper-sensing two-component system response regulator CusR — —
Pseudomonas sp. SVBP6 0.58 COO64_RS15685 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.64 COO64_RS09510 heavy metal response regulator transcription factor low > 93
Pseudomonas stutzeri RCH2 0.58 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.67 Psest_1185 heavy metal response regulator low > 67
Klebsiella pneumoniae MKP103 0.56 KDGMDA_11310 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.60 KDGMDA_00640 copper response regulator transcription factor PcoR low > 95
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS11350 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.59 PagCFBP13505_RS14010 response regulator transcription factor HprR low > 74
Acidovorax sp. GW101-3H11 0.54 Ac3H11_4032 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.65 Ac3H11_4210 DNA-binding heavy metal response regulator low > 79
Acinetobacter baumannii LAC-4 0.50 RR41_RS18930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.65 RR41_RS02755 heavy metal response regulator transcription factor low > 55
Rhodanobacter denitrificans MT42 0.48 LRK55_RS06355 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.67 LRK55_RS17060 heavy metal response regulator transcription factor low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS06610 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.66 LRK54_RS17690 heavy metal response regulator transcription factor low > 59

Not shown: 54 genomes with orthologs for RR42_RS17675 only; 11 genomes with orthologs for RR42_RS30960 only