Conservation of cofitness between RR42_RS16015 and RR42_RS26395 in Cupriavidus basilensis FW507-4G11

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS16015 membrane protein 1.0 RR42_RS26395 hemolysin secretion protein D 0.48 5
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS25020 OmpA family protein 0.44 QEN71_RS35170 macrolide transporter subunit MacA low > 153
Acinetobacter radioresistens SK82 0.36 MPMX26_02417 putative lipoprotein YiaD 0.39 MPMX26_00467 Macrolide export protein MacA low > 36
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10830 OmpA family protein 0.12 ABCV34_RS01440 efflux RND transporter periplasmic adaptor subunit low > 48
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_1444 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.15 Ga0059261_1322 RND family efflux transporter, MFP subunit low > 68
Klebsiella michiganensis M5al 0.30 BWI76_RS26935 OmpA family lipoprotein 0.37 BWI76_RS09595 macrolide transporter subunit MacA low > 92
Escherichia coli BL21 0.30 ECD_03402 multicopy suppressor of bamB; outer membrane lipoprotein 0.39 ECD_00883 macrolide transporter membrane fusion protein (MFP) component low > 61
Sinorhizobium meliloti 1021 0.30 SMc00354 hypothetical protein 0.32 SMc04350 multidrug efflux system transmembrane protein — —
Fusobacterium nucleatum SB010 0.30 HUW76_03925 OmpA family protein 0.23 HUW76_07970 efflux RND transporter periplasmic adaptor subunit low > 35
Pseudomonas sp. RS175 0.29 PFR28_00255 putative lipoprotein YiaD 0.47 PFR28_02258 Macrolide export protein MacA — —
Enterobacter sp. TBS_079 0.29 MPMX20_00182 putative lipoprotein YiaD 0.37 MPMX20_01540 Macrolide export protein MacA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF459 Outer membrane protein A precursor 0.38 GFF4905 Macrolide-specific efflux protein MacA low > 78
Rhizobium sp. OAE497 0.29 ABIE40_RS11645 OmpA family protein 0.19 ABIE40_RS09205 efflux RND transporter periplasmic adaptor subunit low > 107
Enterobacter asburiae PDN3 0.29 EX28DRAFT_3812 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.36 EX28DRAFT_2054 RND family efflux transporter, MFP subunit low > 76
Escherichia fergusonii Becca 0.29 EFB2_00255 putative lipoprotein YiaD 0.39 EFB2_03183 Macrolide export protein MacA low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_1005 OmpA/MotB 0.47 Psyr_2617 Secretion protein HlyD low > 86
Escherichia coli ECRC98 0.29 JDDGAC_19655 yiaD OmpA family lipoprotein 0.38 JDDGAC_09445 macA macrolide transporter subunit MacA low > 86
Escherichia coli ECRC100 0.29 OKFHMN_16025 yiaD OmpA family lipoprotein 0.38 OKFHMN_05810 macA macrolide transporter subunit MacA low > 80
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS21940 membrane protein 0.41 HSERO_RS10245 hemolysin secretion protein D low > 78
Escherichia coli ECRC62 0.29 BNILDI_03575 yiaD OmpA family lipoprotein 0.39 BNILDI_20460 macA macrolide transporter subunit MacA low > 75
Escherichia coli BW25113 0.29 b3552 yiaD predicted outer membrane lipoprotien (NCBI) 0.39 b0878 b0878 putative membrane protein (VIMSS) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_1005 OmpA/MotB 0.47 Psyr_2617 Secretion protein HlyD low > 86
Escherichia coli ECOR38 0.29 HEPCGN_14915 yiaD OmpA family lipoprotein 0.39 HEPCGN_22875 macA macrolide transporter subunit MacA low > 87
Escherichia coli ECOR27 0.29 NOLOHH_07970 yiaD OmpA family lipoprotein 0.39 NOLOHH_22205 macA macrolide transporter subunit MacA low > 75
Escherichia coli ECRC102 0.29 NIAGMN_13785 yiaD OmpA family lipoprotein 0.38 NIAGMN_03850 macA macrolide transporter subunit MacA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00154 putative lipoprotein YiaD 0.39 OHPLBJKB_02790 Macrolide export protein MacA low > 73
Escherichia coli ECRC101 0.29 MCAODC_06540 yiaD OmpA family lipoprotein 0.38 MCAODC_25025 macA macrolide transporter subunit MacA low > 87
Escherichia coli ECRC99 0.29 KEDOAH_12125 yiaD OmpA family lipoprotein 0.38 KEDOAH_22100 macA macrolide transporter subunit MacA — —
Escherichia coli Nissle 1917 0.29 ECOLIN_RS20325 OmpA family lipoprotein 0.39 ECOLIN_RS04675 macrolide transporter subunit MacA — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_17015 cell envelope biogenesis protein OmpA 0.48 AO356_28205 hemolysin secretion protein D low > 104
Agrobacterium fabrum C58 0.28 Atu2722 porin 0.32 Atu5177 efflux protein low > 89
Variovorax sp. SCN45 0.28 GFF5449 Probable lipoprotein YiaD 0.58 GFF1292 Macrolide-specific efflux protein MacA low > 127
Serratia liquefaciens MT49 0.27 IAI46_00110 OmpA family lipoprotein 0.41 IAI46_09285 efflux RND transporter periplasmic adaptor subunit low > 86
Alteromonas macleodii MIT1002 0.26 MIT1002_04106 Inner membrane lipoprotein YiaD precursor 0.28 MIT1002_00481 Macrolide-specific efflux protein MacA precursor low > 70
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS04630 OmpA family lipoprotein 0.46 PFLU_RS12495 macrolide transporter subunit MacA low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS04630 OmpA family lipoprotein 0.46 PFLU_RS12495 macrolide transporter subunit MacA low > 109
Shewanella sp. ANA-3 0.26 Shewana3_0665 OmpA/MotB domain-containing protein (RefSeq) 0.39 Shewana3_3456 RND family efflux transporter MFP subunit (RefSeq) low > 73
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS03090 OmpA family protein 0.13 ABZR88_RS01520 efflux RND transporter periplasmic adaptor subunit low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS22415 hypothetical protein 0.12 CA265_RS16380 efflux transporter periplasmic adaptor subunit low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_14415 hypothetical protein 0.15 CA264_05635 efflux transporter periplasmic adaptor subunit low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0018 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 0.13 Echvi_2835 RND family efflux transporter, MFP subunit low > 79
Bacteroides thetaiotaomicron VPI-5482 0.20 BT1194 outer membrane protein, OmpA family (NCBI ptt file) 0.19 BT1213 periplasmic component of efflux system (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS03790 OmpA family protein 0.16 HMPREF1058_RS18060 efflux RND transporter periplasmic adaptor subunit low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS17430 OmpA family protein 0.17 ABI39_RS14385 efflux RND transporter periplasmic adaptor subunit low > 72
Bacteroides ovatus ATCC 8483 0.20 BACOVA_03981 OmpA family protein 0.18 BACOVA_03964 efflux transporter, RND family, MFP subunit 0.43 47

Not shown: 29 genomes with orthologs for RR42_RS16015 only; 9 genomes with orthologs for RR42_RS26395 only