Conservation of cofitness between RR42_RS11465 and RR42_RS20125 in Cupriavidus basilensis FW507-4G11

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11465 pyrroloquinoline quinone biosynthesis protein PqqC 1.0 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.27 15
Ralstonia sp. UNC404CL21Col 0.87 ABZR87_RS15950 pyrroloquinoline-quinone synthase PqqC 0.75 ABZR87_RS03970 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_01331 pyrroloquinoline-quinone synthase 0.66 H281DRAFT_02404 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS32685 pyrroloquinoline-quinone synthase PqqC 0.66 QEN71_RS29240 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 153
Pantoea sp. MT58 0.68 IAI47_10215 pyrroloquinoline-quinone synthase PqqC 0.67 IAI47_08195 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 76
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_3515 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) 0.73 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 87
Rahnella sp. WP5 0.67 EX31_RS00665 pyrroloquinoline-quinone synthase PqqC 0.71 EX31_RS09420 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 89
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4672 Coenzyme PQQ synthesis C 0.71 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4672 Coenzyme PQQ synthesis C 0.71 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Marinobacter adhaerens HP15 0.66 HP15_3139 pyrroloquinoline quinone biosynthesis protein PqqC 0.37 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 73
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2501 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) 0.73 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_22400 pyrroloquinoline quinone biosynthesis protein PqqC 0.74 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_30415 pyrroloquinoline quinone biosynthesis protein PqqC 0.73 AO356_09015 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_1945 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) 0.74 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 103
Pseudomonas sp. RS175 0.65 PFR28_04088 Pyrroloquinoline-quinone synthase 0.73 PFR28_05053 Bifunctional protein PutA low > 88
Pseudomonas putida KT2440 0.65 PP_0378 Pyrroloquinoline-quinone synthase 0.73 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase low > 96
Pseudomonas simiae WCS417 0.64 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.73 PS417_02175 transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS27575 pyrroloquinoline-quinone synthase PqqC 0.73 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS27575 pyrroloquinoline-quinone synthase PqqC 0.73 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Alteromonas macleodii MIT1002 0.63 MIT1002_03287 Pyrroloquinoline-quinone synthase 0.38 MIT1002_00637 Bifunctional protein PutA low > 70
Sinorhizobium meliloti 1021 0.44 SM_b20206 pyrroloquinoline quinone biosynthesis protein PqqC 0.53 SMc02181 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase low > 103
Dinoroseobacter shibae DFL-12 0.43 Dshi_0452 coenzyme PQQ biosynthesis protein C (RefSeq) 0.37 Dshi_2311 delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) low > 64
Azospirillum sp. SherDot2 0.42 MPMX19_05112 Bifunctional coenzyme PQQ synthesis protein C/D 0.55 MPMX19_05932 Bifunctional protein PutA low > 112
Azospirillum brasilense Sp245 0.41 AZOBR_RS07540 pyrroloquinoline quinone biosynthesis protein PqqC 0.57 AZOBR_RS23695 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 97

Not shown: 5 genomes with orthologs for RR42_RS11465 only; 40 genomes with orthologs for RR42_RS20125 only