Conservation of cofitness between RR42_RS11460 and RR42_RS20125 in Cupriavidus basilensis FW507-4G11

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11460 pyrroloquinoline quinone biosynthesis protein PqqB 1.0 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.27 15
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS15945 pyrroloquinoline quinone biosynthesis protein PqqB 0.75 ABZR87_RS03970 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 80
Paraburkholderia graminis OAS925 0.66 ABIE53_005483 pyrroloquinoline quinone biosynthesis protein B 0.62 ABIE53_000244 RHH-type proline utilization regulon transcriptional repressor/proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_01330 pyrroloquinoline quinone biosynthesis protein B 0.66 H281DRAFT_02404 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS32690 pyrroloquinoline quinone biosynthesis protein PqqB 0.66 QEN71_RS29240 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 153
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3516 Coenzyme PQQ synthesis protein B 0.73 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_22395 pyrroloquinoline quinone biosynthesis protein PqqB 0.74 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_4503 Coenzyme PQQ synthesis protein B 0.73 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) — —
Marinobacter adhaerens HP15 0.55 HP15_3140 pyrroloquinoline quinone biosynthesis protein PqqB 0.37 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) low > 73
Pseudomonas sp. RS175 0.54 PFR28_04087 Coenzyme PQQ synthesis protein B 0.73 PFR28_05053 Bifunctional protein PutA low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4775 Coenzyme PQQ synthesis protein B 0.74 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) low > 103
Pseudomonas simiae WCS417 0.53 PS417_25925 pyrroloquinoline quinone biosynthesis protein PqqB 0.73 PS417_02175 transcriptional regulator — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_14215 pyrroloquinoline quinone biosynthesis protein PqqB 0.73 AO356_09015 transcriptional regulator low > 104
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS27570 pyrroloquinoline quinone biosynthesis protein PqqB 0.73 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS27570 pyrroloquinoline quinone biosynthesis protein PqqB 0.73 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 109
Pseudomonas putida KT2440 0.53 PP_0379 Coenzyme PQQ synthesis protein B 0.73 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4671 coenzyme PQQ synthesis protein B 0.71 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4671 coenzyme PQQ synthesis protein B 0.71 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase low > 86
Pantoea sp. MT58 0.49 IAI47_10220 pyrroloquinoline quinone biosynthesis protein PqqB 0.67 IAI47_08195 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 76
Rahnella sp. WP5 0.48 EX31_RS00670 pyrroloquinoline quinone biosynthesis protein PqqB 0.71 EX31_RS09420 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase low > 89
Alteromonas macleodii MIT1002 0.45 MIT1002_03286 Pyrroloquinoline quinone biosynthesis protein B 0.38 MIT1002_00637 Bifunctional protein PutA low > 70
Azospirillum sp. SherDot2 0.32 MPMX19_05113 Coenzyme PQQ synthesis protein B 0.55 MPMX19_05932 Bifunctional protein PutA low > 112
Sinorhizobium meliloti 1021 0.31 SM_b20205 pyrroloquinoline quinone biosynthesis protein PqqB 0.53 SMc02181 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase low > 103
Dinoroseobacter shibae DFL-12 0.30 Dshi_0451 coenzyme PQQ biosynthesis protein B (RefSeq) 0.37 Dshi_2311 delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) low > 64

Not shown: 5 genomes with orthologs for RR42_RS11460 only; 40 genomes with orthologs for RR42_RS20125 only