| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS23730 | | phenylacetate-CoA oxygenase subunit PaaB | 1.0 | RR42_RS17385 | | LysR family transcriptional regulator | 0.38 | 14 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS28400 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | 0.81 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.56 | 32 |
| Burkholderia phytofirmans PsJN | 0.86 | BPHYT_RS18255 | | phenylacetate-CoA oxygenase subunit PaaB | 0.80 | BPHYT_RS03470 | | LysR family transcriptional regulator | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.86 | ABIE53_000004 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB | 0.80 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.85 | H281DRAFT_05857 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB | 0.81 | H281DRAFT_04673 | | transcriptional regulator, LysR family | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.78 | ABZR87_RS21255 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | 0.84 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.77 | UW163_RS18520 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.82 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | — | — |
| Ralstonia solanacearum PSI07 | 0.77 | RPSI07_RS02135 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.81 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.77 | RALBFv3_RS20655 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.82 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS20010 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.82 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF1686 | | Phenylacetate-CoA oxygenase, PaaH subunit | 0.64 | GFF2803 | | Hydrogen peroxide-inducible genes activator | low | > 90 |
| Variovorax sp. SCN45 | 0.76 | GFF6094 | | 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) | 0.67 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | 0.44 | 55 |
| Variovorax sp. OAS795 | 0.75 | ABID97_RS22790 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | 0.66 | ABID97_RS01570 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Sinorhizobium meliloti 1021 | 0.67 | SM_b21639 | | phenylacetate-CoA oxygenase subunit PaaB | 0.28 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.66 | HSERO_RS20615 | | phenylacetate-CoA oxygenase subunit PaaB | 0.71 | HSERO_RS18935 | | LysR family transcriptional regulator | low | > 78 |
| Rhodopseudomonas palustris CGA009 | 0.66 | TX73_019505 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.27 | TX73_002235 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Azospirillum sp. SherDot2 | 0.65 | MPMX19_05771 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | 0.31 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | low | > 112 |
| Phaeobacter inhibens DSM 17395 | 0.65 | PGA1_c04070 | | phenylacetic acid degradation protein PaaB | 0.28 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_2426 | | Phenylacetate-CoA oxygenase, PaaH subunit | 0.46 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.64 | MPMX26_01559 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | 0.23 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | — | — |
| Pseudomonas putida KT2440 | 0.64 | PP_3277 | | ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit | 0.47 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | low | > 96 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_2698 | | phenylacetate-CoA oxygenase, PaaH subunit | 0.49 | HP15_308 | | oxidative stress regulatory protein OxyR | low | > 73 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_16355 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.32 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | low | > 86 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_1419 | | phenylacetate-CoA oxygenase, PaaH subunit | 0.33 | EX28DRAFT_4424 | | Transcriptional regulator | — | — |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_02143 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | 0.33 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_02322 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | 0.32 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | low | > 73 |
| Escherichia coli ECRC62 | 0.61 | BNILDI_17940 | paaB | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.32 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_19485 | paaB | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.32 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli BW25113 | 0.61 | b1389 | paaB | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | 0.32 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | — | — |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS13095 | | phenylacetate-CoA oxygenase subunit PaaB | 0.33 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | low | > 92 |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_3819 | | phenylacetate-CoA oxygenase, PaaH subunit (RefSeq) | 0.26 | Dshi_3802 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
Not shown: 0 genomes with orthologs for RR42_RS23730 only; 65 genomes with orthologs for RR42_RS17385 only