Conservation of cofitness between RR42_RS01445 and RR42_RS16195 in Cupriavidus basilensis FW507-4G11

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA 1.0 RR42_RS16195 haloacid dehalogenase 0.33 7
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.16 GFF3512 2-deoxyglucose-6-phosphate hydrolase YniC low > 78
Escherichia coli BL21 0.60 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein 0.16 ECD_01696 2-deoxyglucose-6-P phosphatase low > 61
Pantoea sp. MT58 0.60 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA 0.17 IAI47_04340 fructose-1-phosphate/6-phosphogluconate phosphatase low > 76
Rahnella sp. WP5 0.59 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.17 EX31_RS14100 hexitol phosphatase HxpB low > 89
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA 0.29 CSW01_14525 HAD family phosphatase low > 62
Enterobacter asburiae PDN3 0.59 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.16 EX28DRAFT_1732 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED low > 76
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 0.19 Pf1N1B4_3808 hydrolase, haloacid dehalogenase-like family low > 87
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.20 PfGW456L13_4130 hydrolase, haloacid dehalogenase-like family low > 87
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.20 AO353_00950 HAD family hydrolase low > 101
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA 0.19 AO356_20805 HAD family hydrolase low > 104
Pseudomonas sp. RS175 0.59 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase 0.19 PFR28_02940 Phosphoglycolate phosphatase low > 88
Pseudomonas simiae WCS417 0.58 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.18 PS417_21150 HAD family hydrolase low > 88
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3705 conserved hypothetical protein 0.19 Psyr_5006 HAD-superfamily hydrolase, subfamily IA, variant 3 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3705 conserved hypothetical protein 0.19 Psyr_5006 HAD-superfamily hydrolase, subfamily IA, variant 3 0.38 63
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase 0.18 Pf6N2E2_6049 hydrolase, haloacid dehalogenase-like family low > 103
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.18 PFLU_RS22765 HAD-IA family hydrolase low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.18 PFLU_RS22765 HAD-IA family hydrolase low > 109
Acidovorax sp. GW101-3H11 0.58 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase 0.19 Ac3H11_2632 Beta-phosphoglucomutase (EC 5.4.2.6) low > 79
Variovorax sp. OAS795 0.56 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA 0.46 ABID97_RS07650 HAD family phosphatase low > 91
Variovorax sp. SCN45 0.56 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.52 GFF5680 Phosphoglycolate phosphatase (EC 3.1.3.18) low > 127
Lysobacter sp. OAE881 0.54 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA 0.28 ABIE51_RS18475 HAD family phosphatase low > 62
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA 0.26 LRK55_RS08925 HAD family phosphatase low > 63
Shewanella loihica PV-4 0.53 Shew_1995 PP-loop domain-containing protein (RefSeq) 0.17 Shew_3425 2-deoxyglucose-6-phosphatase (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase 0.22 Xcc-8004.4610.1 hypothetical protein low > 74
Agrobacterium fabrum C58 0.42 Atu1858 hypothetical protein 0.20 Atu0763 hydrolase low > 89

Not shown: 43 genomes with orthologs for RR42_RS01445 only; 10 genomes with orthologs for RR42_RS16195 only