Conservation of cofitness between RR42_RS37440 and RR42_RS15915 in Cupriavidus basilensis FW507-4G11

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS37440 phosphogluconate dehydratase 1.0 RR42_RS15915 RNA polymerase subunit sigma-24 0.44 3
Ralstonia solanacearum PSI07 0.78 RPSI07_RS07320 phosphogluconate dehydratase 0.61 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor low > 81
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS22920 phosphogluconate dehydratase 0.66 ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor low > 80
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS16385 phosphogluconate dehydratase 0.60 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor low > 76
Ralstonia solanacearum UW163 0.77 UW163_RS17125 phosphogluconate dehydratase 0.60 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor
Ralstonia solanacearum GMI1000 0.77 RS_RS24620 phosphogluconate dehydratase 0.58 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor low > 80
Rhizobium sp. OAE497 0.62 ABIE40_RS03190 phosphogluconate dehydratase 0.31 ABIE40_RS01975 sigma-70 family RNA polymerase sigma factor low > 107
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS24330 phosphogluconate dehydratase 0.41 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS24330 phosphogluconate dehydratase 0.41 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor low > 109
Pseudomonas simiae WCS417 0.61 PS417_22690 phosphogluconate dehydratase 0.29 PS417_12610 RNA polymerase sigma factor low > 88
Agrobacterium fabrum C58 0.61 Atu0598 phosphogluconate dehydratase 0.33 Atu0474 putative RNA polymerase sigma-70 factor low > 89
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_03420 phosphogluconate dehydratase 0.42 AO353_07625 RNA polymerase subunit sigma-70 low > 101
Pseudomonas putida KT2440 0.61 PP_1010 phosphogluconate dehydratase 0.25 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF5495 Phosphogluconate dehydratase (EC 4.2.1.12) 0.31 GFF365 RNA polymerase sigma factor
Alteromonas macleodii MIT1002 0.60 MIT1002_02405 Phosphogluconate dehydratase 0.33 MIT1002_03202 Sigma-K factor low > 70
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1109 6-phosphogluconate dehydratase 0.26 Psyr_0362 Sigma-70 region 2 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1109 6-phosphogluconate dehydratase 0.26 Psyr_0362 Sigma-70 region 2 low > 86
Shewanella sp. ANA-3 0.60 Shewana3_2149 phosphogluconate dehydratase (RefSeq) 0.22 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) low > 73
Rahnella sp. WP5 0.60 EX31_RS16630 phosphogluconate dehydratase 0.38 EX31_RS18905 sigma-70 family RNA polymerase sigma factor low > 89
Shewanella loihica PV-4 0.60 Shew_2046 phosphogluconate dehydratase (RefSeq) 0.17 Shew_1476 RNA polymerase sigma factor (RefSeq)
Enterobacter asburiae PDN3 0.59 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) 0.34 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family low > 76
Dinoroseobacter shibae DFL-12 0.58 Dshi_1769 6-phosphogluconate dehydratase (RefSeq) 0.21 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) low > 64
Marinobacter adhaerens HP15 0.57 HP15_2174 6-phosphogluconate dehydratase 0.38 HP15_3899 RNA polymerase, sigma-24 subunit, ECF subfamily low > 73
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS07880 phosphogluconate dehydratase 0.31 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor
Rhodanobacter denitrificans MT42 0.57 LRK55_RS07610 phosphogluconate dehydratase 0.18 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_14370 edd phosphogluconate dehydratase 0.31 OKGIIK_05040 RNA polymerase subunit sigma
Variovorax sp. OAS795 0.56 ABID97_RS21300 phosphogluconate dehydratase 0.50 ABID97_RS08165 sigma-70 family RNA polymerase sigma factor low > 91
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_01480 phosphogluconate dehydratase 0.17 CSW01_11715 RNA polymerase subunit sigma low > 62

Not shown: 32 genomes with orthologs for RR42_RS37440 only; 21 genomes with orthologs for RR42_RS15915 only