| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS29655 | | amino acid ABC transporter permease | 1.0 | RR42_RS14260 | | transcriptional regulator | 0.38 | 18 |
| Paraburkholderia sabiae LMG 24235 | 0.80 | QEN71_RS23390 | | ABC transporter permease | 0.39 | QEN71_RS35010 | | response regulator | low | > 153 |
| Rahnella sp. WP5 | 0.66 | EX31_RS19550 | | ABC transporter permease | 0.38 | EX31_RS06520 | | two-component system response regulator RstA | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_4637 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | 0.51 | PfGW456L13_2956 | | Transcriptional regulatory protein RstA | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS06470 | | ABC transporter permease | 0.50 | PFLU_RS13290 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS06470 | | ABC transporter permease | 0.50 | PFLU_RS13290 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_27110 | | amino acid ABC transporter permease | 0.50 | AO356_22905 | | transcriptional regulator | low | > 104 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_00505 | | Histidine transport system permease protein HisM | 0.49 | PFR28_02461 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_16960 | | amino acid ABC transporter permease | 0.50 | AO353_26835 | | transcriptional regulator | low | > 101 |
| Pantoea sp. MT58 | 0.65 | IAI47_06295 | | ABC transporter permease | 0.38 | IAI47_09545 | | two-component system response regulator RstA | low | > 76 |
| Pseudomonas simiae WCS417 | 0.65 | PS417_06405 | | amino acid ABC transporter permease | 0.50 | PS417_12595 | | transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_2960 | | ABC transporter for L-Lysine, permease component 2 (from data) | 0.50 | Pf6N2E2_463 | | Transcriptional regulatory protein RstA | low | > 103 |
| Escherichia fergusonii Becca | 0.65 | EFB2_01551 | | Histidine transport system permease protein HisM | 0.36 | EFB2_02384 | | Transcriptional regulatory protein RstA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.65 | ECOLIN_RS13380 | | ABC transporter permease | 0.36 | ECOLIN_RS08980 | | two-component system response regulator RstA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.65 | Pf1N1B4_3177 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | 0.50 | Pf1N1B4_4774 | | Transcriptional regulatory protein RstA | — | — |
| Escherichia coli BL21 | 0.65 | ECD_02232 | | histidine ABC transporter permease | 0.36 | ECD_01577 | | response regulator of RstAB two-component system | low | > 61 |
| Escherichia coli BW25113 | 0.65 | b2307 | hisM | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | 0.36 | b1608 | rstA | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | low | > 76 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_17790 | | ABC transporter permease | 0.39 | IAI46_13300 | | two-component system response regulator RstA | low | > 86 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_21935 | hisM | Histidine transport system permease protein HisM | 0.36 | HEPCGN_06040 | rstA | two-component system response regulator RstA | low | > 87 |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_20510 | hisM | Histidine transport system permease protein HisM | 0.36 | NIAGMN_00410 | rstA | two-component system response regulator RstA | — | — |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_14360 | hisM | Histidine transport system permease protein HisM | 0.36 | NOLOHH_18170 | rstA | two-component system response regulator RstA | — | — |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_26700 | hisM | Histidine transport system permease protein HisM | 0.36 | JDDGAC_02255 | rstA | two-component system response regulator RstA | low | > 86 |
| Escherichia coli ECRC62 | 0.64 | BNILDI_13280 | hisM | Histidine transport system permease protein HisM | 0.36 | BNILDI_16960 | rstA | two-component system response regulator RstA | low | > 75 |
| Escherichia coli ECRC100 | 0.64 | OKFHMN_22740 | hisM | Histidine transport system permease protein HisM | 0.36 | OKFHMN_27665 | rstA | two-component system response regulator RstA | — | — |
| Escherichia coli ECRC101 | 0.64 | MCAODC_13780 | hisM | Histidine transport system permease protein HisM | 0.36 | MCAODC_17745 | rstA | two-component system response regulator RstA | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.64 | GFF1916 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | 0.37 | GFF1800 | | Transcriptional regulatory protein RstA | low | > 78 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS14415 | | ABC transporter permease | 0.42 | DDA3937_RS12230 | | two-component system response regulator RstA | low | > 74 |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_05455 | hisM | Histidine transport system permease protein HisM | 0.36 | KEDOAH_00440 | rstA | two-component system response regulator RstA | — | — |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS20325 | | histidine/lysine/arginine/ornithine ABC transporter permease HisM | 0.37 | BWI76_RS16250 | | DNA-binding response regulator | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_01398 | | Histidine transport system permease protein HisM | 0.36 | OHPLBJKB_02118 | | Transcriptional regulatory protein RstA | low | > 73 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_0297 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | 0.38 | EX28DRAFT_1549 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | low | > 76 |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_03242 | | Histidine transport system permease protein HisM | 0.38 | MPMX20_02026 | | Transcriptional regulatory protein RstA | low | > 85 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | 0.41 | Psyr_3716 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | 0.41 | Psyr_3716 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS07040 | | ABC transporter permease | 0.39 | HER17_RS09695 | | two-component system response regulator RstA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS14385 | | ABC transporter permease | 0.43 | HGI48_RS12320 | | two-component system response regulator RstA | low | > 71 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS15315 | | ABC transporter permease | 0.43 | DZA65_RS12760 | | two-component system response regulator RstA | low | > 75 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_21265 | | Arginine/ornithine ABC transporter, permease protein AotM | 0.41 | OH686_20345 | | Two-component transcriptional response regulator, OmpR family | low | > 80 |
| Pseudomonas putida KT2440 | 0.45 | PP_4484 | | histidine / lysine / arginine / ornithine ABC transporter - permease subunit | 0.50 | PP_3454 | | putative transcriptional regulatory protein | low | > 96 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_09320 | | amino acid ABC transporter permease | 0.40 | CSW01_06665 | | DNA-binding response regulator | low | > 62 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_3033 | | amino acid ABC transporter, inner membrane subunit | 0.41 | HP15_746 | | two component transcriptional regulator, winged helix family | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_0136 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | 0.37 | Psest_2730 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | low | > 67 |
| Erwinia tracheiphila SCR3 | 0.21 | LU632_RS09670 | artM | arginine ABC transporter permease ArtM | 0.39 | LU632_RS11455 | rstA | two-component system response regulator RstA | low | > 74 |
Not shown: 14 genomes with orthologs for RR42_RS29655 only; 13 genomes with orthologs for RR42_RS14260 only