Conservation of cofitness between RR42_RS01445 and RR42_RS14190 in Cupriavidus basilensis FW507-4G11

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA 1.0 RR42_RS14190 2-hydroxyacid dehydrogenase 0.39 2
Ralstonia solanacearum GMI1000 0.82 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA 0.66 RS_RS05120 D-glycerate dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 ABZR87_RS10055 D-glycerate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.82 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA 0.66 UW163_RS11805 D-glycerate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA 0.66 RALBFv3_RS14340 D-glycerate dehydrogenase low > 76
Ralstonia solanacearum PSI07 0.81 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA 0.67 RPSI07_RS19120 D-glycerate dehydrogenase 0.60 21
Dechlorosoma suillum PS 0.63 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control 0.23 Dsui_0124 lactate dehydrogenase-like oxidoreductase low > 51
Alteromonas macleodii MIT1002 0.61 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA 0.19 MIT1002_01974 D-lactate dehydrogenase low > 70
Pseudomonas stutzeri RCH2 0.59 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.29 Psest_0431 Lactate dehydrogenase and related dehydrogenases low > 67
Acidovorax sp. GW101-3H11 0.58 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase 0.64 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) low > 79
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase 0.66 H281DRAFT_04333 Lactate dehydrogenase low > 103
Variovorax sp. OAS795 0.56 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA 0.65 ABID97_RS10600 D-glycerate dehydrogenase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase 0.68 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) low > 90
Variovorax sp. SCN45 0.56 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.65 GFF2868 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) low > 127
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA 0.64 HSERO_RS08110 2-hydroxyacid dehydrogenase low > 78
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA 0.66 QEN71_RS04460 D-glycerate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.54 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA 0.67 ABIE53_003066 gluconate 2-dehydrogenase low > 113
Lysobacter sp. OAE881 0.54 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA 0.57 ABIE51_RS08225 D-glycerate dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA 0.57 ABZR86_RS08035 D-glycerate dehydrogenase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase 0.57 Xcc-8004.1956.1 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) low > 74
Sinorhizobium meliloti 1021 0.44 SMc00534 C32 tRNA thiolase 0.32 SMc02849 2-hydroxyacid dehydrogenase low > 103
Rhizobium sp. OAE497 0.43 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA 0.34 ABIE40_RS14685 D-glycerate dehydrogenase low > 107
Phaeobacter inhibens DSM 17395 0.43 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA 0.30 PGA1_c28260 glyoxylate reductase GyaR low > 62
Agrobacterium fabrum C58 0.42 Atu1858 hypothetical protein 0.30 Atu0077 D-isomer specific 2-hydroxyacid dehydrogenases family protein low > 89

Not shown: 45 genomes with orthologs for RR42_RS01445 only; 13 genomes with orthologs for RR42_RS14190 only