Conservation of cofitness between RR42_RS12225 and RR42_RS13360 in Cupriavidus basilensis FW507-4G11

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS12225 LytR family transcriptional regulator 1.0 RR42_RS13360 esterase 0.32 14
Ralstonia solanacearum PSI07 0.61 RPSI07_RS17365 DNA-binding response regulator 0.66 RPSI07_RS18315 esterase low > 81
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS11570 LytTR family DNA-binding domain-containing protein 0.66 ABZR87_RS10705 patatin-like phospholipase family protein low > 80
Ralstonia solanacearum GMI1000 0.59 RS_RS06780 DNA-binding response regulator 0.65 RS_RS05875 esterase low > 80
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS00120 DNA-binding response regulator 0.64 RALBFv3_RS15060 esterase low > 76
Ralstonia solanacearum UW163 0.58 UW163_RS13450 DNA-binding response regulator 0.64 UW163_RS12530 esterase — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS18060 LytR family transcriptional regulator 0.54 HSERO_RS06905 esterase low > 78
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS01420 LytTR family DNA-binding domain-containing protein 0.46 ABZR86_RS15245 patatin-like phospholipase family protein low > 74
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00285 LytTR family DNA-binding domain-containing protein 0.45 LRK55_RS08135 patatin-like phospholipase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00550 LytTR family DNA-binding domain-containing protein 0.45 LRK54_RS08370 patatin-like phospholipase family protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.4655.1 Transcriptional regulator protein 0.45 Xcc-8004.214.1 UPF0028 protein YchK low > 74
Dechlorosoma suillum PS 0.21 Dsui_0109 response regulator of the LytR/AlgR family 0.48 Dsui_2971 putative esterase of the alpha-beta hydrolase superfamily low > 51
Klebsiella michiganensis M5al 0.19 BWI76_RS20505 DNA-binding response regulator 0.22 BWI76_RS17280 patatin family protein low > 92
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_14425 lytT DNA-binding response regulator 0.46 OKGIIK_15130 Patatin low > 52
Pantoea sp. MT58 0.19 IAI47_05560 response regulator transcription factor 0.24 IAI47_09020 patatin-like phospholipase RssA low > 76
Escherichia coli ECOR38 0.18 HEPCGN_21570 ypdB two-component system response regulator YpdB 0.22 HEPCGN_25040 rssA patatin-like phospholipase RssA low > 87
Escherichia coli ECRC102 0.18 NIAGMN_20135 ypdB two-component system response regulator YpdB 0.22 NIAGMN_27655 rssA patatin-like phospholipase RssA — —
Escherichia coli ECRC98 0.18 JDDGAC_26325 ypdB two-component system response regulator YpdB 0.22 JDDGAC_05995 rssA patatin-like phospholipase RssA low > 86
Escherichia coli ECRC100 0.18 OKFHMN_22360 ypdB two-component system response regulator YpdB 0.22 OKFHMN_28580 rssA patatin-like phospholipase RssA low > 80
Escherichia coli ECRC101 0.18 MCAODC_12890 ypdB two-component system response regulator YpdB 0.22 MCAODC_21680 rssA patatin-like phospholipase RssA low > 87
Escherichia coli ECOR27 0.18 NOLOHH_14045 ypdB two-component system response regulator YpdB 0.22 NOLOHH_20470 rssA patatin-like phospholipase RssA low > 75
Escherichia coli ECRC99 0.18 KEDOAH_05860 ypdB two-component system response regulator YpdB 0.22 KEDOAH_25575 rssA patatin-like phospholipase RssA — —
Escherichia coli ECRC62 0.18 BNILDI_12900 ypdB two-component system response regulator YpdB 0.22 BNILDI_18625 rssA patatin-like phospholipase RssA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_01340 Transcriptional regulatory protein YpdB 0.22 OHPLBJKB_02451 putative NTE family protein low > 73
Escherichia coli BW25113 0.18 b2381 ypdB predicted response regulator in two-component system withYpdA (NCBI) 0.22 b1234 rssA conserved protein (RefSeq) low > 76
Escherichia fergusonii Becca 0.18 EFB2_01493 Transcriptional regulatory protein YpdB 0.22 EFB2_02692 putative NTE family protein low > 86
Escherichia coli BL21 0.18 ECD_02291 response regulator activating yhjX; pyruvate-responsive YpdAB two-component system 0.22 ECD_01210 putative patatin-like family phospholipase low > 61
Escherichia coli Nissle 1917 0.18 ECOLIN_RS13700 two-component system response regulator YpdB 0.22 ECOLIN_RS07470 patatin-like phospholipase RssA — —
Enterobacter asburiae PDN3 0.18 EX28DRAFT_0437 two component transcriptional regulator, LytTR family 0.22 EX28DRAFT_0860 Predicted esterase of the alpha-beta hydrolase superfamily low > 76
Azospirillum brasilense Sp245 0.16 AZOBR_RS22560 transcriptional regulator 0.21 AZOBR_RS21865 lysophospholipase — —
Bacteroides ovatus ATCC 8483 0.15 BACOVA_04152 response regulator receiver domain protein 0.17 BACOVA_02506 phospholipase, patatin family low > 94
Sinorhizobium meliloti 1021 0.11 SM_b21545 two-component response regulator protein 0.21 SMc01003 hypothetical protein low > 103

Not shown: 43 genomes with orthologs for RR42_RS12225 only; 12 genomes with orthologs for RR42_RS13360 only