| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS14420 | | branched-chain amino acid transporter permease subunit LivH | 1.0 | RR42_RS12970 | | glycerol-3-phosphate ABC transporter substrate-binding protein | 0.31 | 12 |
| Herbaspirillum seropedicae SmR1 | 0.90 | HSERO_RS08275 | | branched-chain amino acid transporter permease subunit LivH | 0.71 | HSERO_RS18955 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.78 | ABCV34_RS03620 | | branched-chain amino acid ABC transporter permease LivH | 0.55 | ABCV34_RS03605 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 48 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_00965 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.62 | IAI46_00990 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 86 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS20725 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.61 | HGI48_RS20650 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS00500 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.62 | HER17_RS00610 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS21735 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.61 | DZA65_RS21665 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS00665 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.61 | DDA3937_RS00720 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 74 |
| Rahnella sp. WP5 | 0.62 | EX31_RS14800 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.61 | EX31_RS14760 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 89 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_06002 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.49 | MPMX19_00483 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | — | — |
| Pantoea sp. MT58 | 0.60 | IAI47_01570 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.62 | IAI47_01590 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 76 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS08235 | | L-proline and D-alanine ABC transporter, permease component 1 (from data) | 0.50 | AZOBR_RS00075 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 97 |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS26345 | | branched-chain amino acid ABC transporter permease LivH | 0.61 | BWI76_RS26305 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 92 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_4289 | | Branched-chain amino acid ABC-type transport system, permease components | 0.60 | EX28DRAFT_4285 | | ABC-type sugar transport system, periplasmic component | low | > 76 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04333 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.61 | MPMX20_04329 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 85 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_02965 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | BNILDI_02945 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_14515 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | NIAGMN_14540 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_08540 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | NOLOHH_08560 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_07275 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | MCAODC_07300 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 87 |
| Escherichia coli BL21 | 0.58 | ECD_03306 | | branched-chain amino acid ABC transporter permease | 0.60 | ECD_03302 | | sn-glycerol-3-phosphate ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_11395 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | KEDOAH_11370 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_16745 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | OKFHMN_16770 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 80 |
| Escherichia coli BW25113 | 0.58 | b3457 | livH | leucine/isoleucine/valine transporter subunit (NCBI) | 0.60 | b3453 | ugpB | glycerol-3-phosphate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_15565 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | HEPCGN_10875 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_00246 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.60 | OHPLBJKB_00250 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 73 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_20375 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.60 | JDDGAC_20400 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 86 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS19770 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.59 | ECOLIN_RS19745 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 55 |
| Escherichia fergusonii Becca | 0.58 | EFB2_00365 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.59 | EFB2_00369 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF549 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.61 | GFF555 | | Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | low | > 78 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0598 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.20 | Psyr_4502 | | carbohydrate ABC transporter substrate-binding protein, CUT1 family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0598 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.20 | Psyr_4502 | | carbohydrate ABC transporter substrate-binding protein, CUT1 family | low | > 86 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS27580 | | branched-chain amino acid ABC transporter permease LivH | 0.64 | ABID97_RS07230 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 91 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.53 | DVU0548 | livH | high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) | 0.17 | DVU3162 | | ABC transporter, periplasmic substrate-binding protein (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.52 | DvMF_2608 | | inner-membrane translocator (RefSeq) | 0.16 | DvMF_0656 | | extracellular solute-binding protein family 1 (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.51 | Atu2427 | | ABC transporter, membrane spanning protein | 0.49 | Atu3185 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_019710 | | branched-chain amino acid ABC transporter permease | 0.54 | TX73_024885 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.49 | SMc01951 | | high-affinity branched-chain amino acid ABC transporter permease | 0.50 | SM_b20416 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 103 |
| Bosea sp. OAE506 | 0.49 | ABIE41_RS13635 | | branched-chain amino acid ABC transporter permease LivH | 0.54 | ABIE41_RS03450 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 77 |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS14715 | | branched-chain amino acid ABC transporter permease LivH | 0.51 | ABIE40_RS20835 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 107 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_1979 | | inner-membrane translocator (RefSeq) | 0.53 | Dshi_2014 | | extracellular solute-binding protein family 1 (RefSeq) | low | > 64 |
Not shown: 17 genomes with orthologs for RR42_RS14420 only; 14 genomes with orthologs for RR42_RS12970 only