Conservation of cofitness between RR42_RS01405 and RR42_RS04815 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS01405 lytic transglycosylase 1.0 RR42_RS04815 glycine/betaine ABC transporter substrate-binding protein 0.48 7
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS28635 lytic transglycosylase domain-containing protein 0.51 QEN71_RS19710 glycine betaine ABC transporter substrate-binding protein low > 153
Paraburkholderia graminis OAS925 0.50 ABIE53_000044 soluble lytic murein transglycosylase 0.46 ABIE53_001496 osmoprotectant transport system substrate-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_05816 soluble lytic murein transglycosylase 0.46 H281DRAFT_03487 osmoprotectant transport system substrate-binding protein low > 103
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS21415 lytic transglycosylase 0.52 HSERO_RS08535 glycine/betaine ABC transporter substrate-binding protein low > 78
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.43 PfGW456L13_5063 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_00530 lytic transglycosylase 0.42 AO353_05430 glycine/betaine ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens SBW25 0.16 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.42 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.16 PS417_07550 lytic transglycosylase 0.42 PS417_04020 glycine/betaine ABC transporter substrate-binding protein low > 88
Pseudomonas sp. RS175 0.16 PFR28_01106 Soluble lytic murein transglycosylase 0.42 PFR28_00116 Osmoprotectant-binding protein OsmX low > 88
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.42 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.42 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 103
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_02350 lytic transglycosylase 0.42 AO356_07295 glycine/betaine ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.44 Pf1N1B4_1132 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_3295 SLT 0.41 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_3295 SLT 0.41 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas putida KT2440 0.15 PP_2130 putative Soluble lytic transglycosylase 0.43 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein low > 96
Pantoea sp. MT58 0.13 IAI47_16260 murein transglycosylase 0.43 IAI47_09775 glycine betaine ABC transporter substrate-binding protein low > 76
Rahnella sp. WP5 0.12 EX31_RS03985 murein transglycosylase 0.22 EX31_RS23935 ABC transporter substrate-binding protein low > 89
Enterobacter sp. TBS_079 0.12 MPMX20_00699 Soluble lytic murein transglycosylase 0.46 MPMX20_02068 Osmoprotectant-binding protein OsmX low > 85
Enterobacter asburiae PDN3 0.12 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.45 EX28DRAFT_1488 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.43 GFF1780 Putative ABC transporter periplasmic binding protein low > 78
Klebsiella michiganensis M5al 0.12 BWI76_RS04185 murein transglycosylase 0.20 BWI76_RS19505 ABC transporter substrate-binding protein low > 92
Escherichia coli ECRC99 0.12 KEDOAH_16985 sltY murein transglycosylase 0.20 KEDOAH_04525 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli BW25113 0.12 b4392 slt soluble lytic murein transglycosylase (VIMSS) 0.19 b2131 yehZ predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) low > 76
Escherichia fergusonii Becca 0.12 EFB2_04052 Soluble lytic murein transglycosylase 0.20 EFB2_01724 Glycine betaine-binding protein YehZ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.12 OHPLBJKB_03669 Soluble lytic murein transglycosylase 0.19 OHPLBJKB_01579 Glycine betaine-binding protein YehZ low > 73
Escherichia coli ECOR27 0.12 NOLOHH_03500 sltY murein transglycosylase 0.19 NOLOHH_15200 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 75
Escherichia coli ECRC62 0.12 BNILDI_08095 sltY murein transglycosylase 0.19 BNILDI_14150 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 75
Escherichia coli ECRC102 0.12 NIAGMN_09020 sltY murein transglycosylase 0.20 NIAGMN_21425 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli ECRC101 0.12 MCAODC_01685 sltY murein transglycosylase 0.20 MCAODC_14710 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 87
Escherichia coli ECOR38 0.12 HEPCGN_09175 sltY murein transglycosylase 0.20 HEPCGN_02235 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 87
Escherichia coli ECRC100 0.12 OKFHMN_11170 sltY murein transglycosylase 0.20 OKFHMN_23660 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 80
Escherichia coli ECRC98 0.12 JDDGAC_14765 sltY murein transglycosylase 0.20 JDDGAC_27615 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS25210 murein transglycosylase 0.20 ECOLIN_RS25495 glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli BL21 0.11 ECD_04268 lytic murein transglycosylase, soluble 0.19 ECD_02061 putative ABC transporter periplasmic binding protein low > 61
Serratia liquefaciens MT49 0.11 IAI46_02985 murein transglycosylase 0.21 IAI46_07365 ABC transporter substrate-binding protein low > 86
Erwinia tracheiphila SCR3 0.11 LU632_RS02575 sltY murein transglycosylase 0.36 LU632_RS12285 glycine/betaine ABC transporter substrate-binding protein low > 74
Bosea sp. OAE506 0.07 ABIE41_RS19965 lytic transglycosylase domain-containing protein 0.22 ABIE41_RS21060 glycine betaine ABC transporter substrate-binding protein low > 77

Not shown: 29 genomes with orthologs for RR42_RS01405 only; 8 genomes with orthologs for RR42_RS04815 only