Conservation of cofitness between Psyr_0358 and Psyr_4798 in Pseudomonas syringae pv. syringae B728a

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 1.0 Psyr_4798 conserved hypothetical protein 0.35 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 1.00 Psyr_4798 conserved hypothetical protein low > 86
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_444 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.71 PfGW456L13_1056 probable membrane protein NMA1176 low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_11675 cystine transporter subunit 0.70 AO353_07990 hypothetical protein low > 101
Pseudomonas fluorescens SBW25 0.74 PFLU_RS01215 cystine ABC transporter substrate-binding protein 0.74 PFLU_RS28135 membrane protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3919 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.69 Pf6N2E2_4646 probable membrane protein NMA1176 low > 103
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS01215 cystine ABC transporter substrate-binding protein 0.74 PFLU_RS28135 membrane protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_10235 cystine transporter subunit 0.69 AO356_13640 hypothetical protein low > 104
Pseudomonas sp. RS175 0.73 PFR28_04855 L-cystine-binding protein FliY 0.69 PFR28_04196 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.73 PS417_01105 cystine transporter subunit 0.76 PS417_26480 membrane protein low > 88
Pseudomonas putida KT2440 0.70 PP_0227 periplasmic cystine-binding protein 0.65 PP_4972 conserved exported protein of unknown function 0.14 80
Pseudomonas sp. S08-1 0.69 OH686_18905 L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY 0.37 OH686_00370 hypothetical protein low > 80
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10775 cysteine ABC transporter substrate-binding protein 0.36 HSERO_RS18145 membrane protein low > 78
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS08560 cysteine ABC transporter substrate-binding protein 0.34 BPHYT_RS08305 membrane protein low > 109
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04395 cysteine ABC transporter substrate-binding protein 0.34 RR42_RS15230 membrane protein low > 128
Variovorax sp. SCN45 0.27 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) 0.36 GFF1111 probable membrane protein NMA1176 low > 127
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2555 ABC transporter for L-Histidine, periplasmic substrate-binding component 1 (from data) 0.36 Ac3H11_474 probable membrane protein NMA1176 low > 79
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS00675 glutamine ABC transporter substrate-binding protein 0.41 ABZR87_RS09240 MAPEG family protein low > 80
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS22445 amino acid ABC transporter substrate-binding protein 0.41 RALBFv3_RS13165 membrane protein low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS22990 amino acid ABC transporter substrate-binding protein 0.41 UW163_RS00400 membrane protein
Ralstonia solanacearum PSI07 0.23 RPSI07_RS01835 amino acid ABC transporter substrate-binding protein 0.42 RPSI07_RS20050 membrane protein low > 81
Ralstonia solanacearum GMI1000 0.21 RS_RS19470 amino acid ABC transporter substrate-binding protein 0.40 RS_RS03960 membrane protein low > 80
Shewanella loihica PV-4 0.20 Shew_3166 extracellular solute-binding protein (RefSeq) 0.23 Shew_0720 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.20 Shewana3_0882 extracellular solute-binding protein (RefSeq) 0.26 Shewana3_3269 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.19 SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) 0.26 SO3708 membrane protein, putative (NCBI ptt file) low > 76

Not shown: 42 genomes with orthologs for Psyr_0358 only; 5 genomes with orthologs for Psyr_4798 only