| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3165 | | transcriptional regulator, LysR family | 1.0 | Psyr_3512 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | 0.36 | 13 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3165 | | transcriptional regulator, LysR family | 1.00 | Psyr_3512 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS07335 | | LysR family transcriptional regulator | 0.67 | PFLU_RS25080 | | two-component sensor histidine kinase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS07335 | | LysR family transcriptional regulator | 0.67 | PFLU_RS25080 | | two-component sensor histidine kinase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.76 | PS417_07220 | | LysR family transcriptional regulator | 0.50 | PS417_13590 | | histidine kinase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_26720 | | LysR family transcriptional regulator | 0.18 | AO353_19375 | | histidine kinase | low | > 101 |
| Paraburkholderia graminis OAS925 | 0.63 | ABIE53_005445 | | DNA-binding transcriptional LysR family regulator | 0.22 | ABIE53_003417 | | two-component system OmpR family sensor kinase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS11315 | | LysR family transcriptional regulator | 0.24 | QEN71_RS02480 | | ATP-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_03335 | | transcriptional regulator, LysR family | 0.22 | H281DRAFT_04179 | | two-component system, OmpR family, sensor kinase | low | > 103 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_0581 | | Transcriptional regulator | 0.20 | EX28DRAFT_1470 | | Signal transduction histidine kinase | low | > 76 |
| Pseudomonas putida KT2440 | 0.49 | PP_2054 | | putative DNA-binding transcriptional regulator | 0.43 | PP_2714 | | Sensor histidine kinase | 0.19 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_4462 | | LysR family transcriptional regulator YbhD | 0.48 | Pf1N1B4_4453 | | Sensory histidine kinase QseC | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_28895 | | LysR family transcriptional regulator | 0.70 | AO356_27275 | | histidine kinase | low | > 104 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_01942 | | HTH-type transcriptional regulator CynR | 0.49 | PFR28_02327 | | Adaptive-response sensory-kinase SasA | low | > 88 |
| Agrobacterium fabrum C58 | 0.45 | Atu4264 | | LysR family transcriptional regulator | 0.14 | Atu4018 | | two component sensor kinase | low | > 89 |
| Escherichia coli ECOR27 | 0.41 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.20 | NOLOHH_10655 | qseC | two-component system sensor histidine kinase QseC | low | > 75 |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.19 | NIAGMN_16640 | qseC | two-component system sensor histidine kinase QseC | — | — |
| Escherichia coli ECRC101 | 0.41 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.19 | MCAODC_09390 | qseC | two-component system sensor histidine kinase QseC | low | > 87 |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.19 | KEDOAH_09270 | qseC | two-component system sensor histidine kinase QseC | — | — |
| Escherichia coli ECRC100 | 0.41 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.19 | OKFHMN_18875 | qseC | two-component system sensor histidine kinase QseC | low | > 80 |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.19 | JDDGAC_22510 | qseC | two-component system sensor histidine kinase QseC | low | > 86 |
| Escherichia coli BW25113 | 0.41 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | 0.19 | b3026 | qseC | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS04090 | | LysR family transcriptional regulator | 0.19 | ECOLIN_RS17430 | | quorum sensing histidine kinase QseC | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.41 | OHPLBJKB_02945 | | Hydrogen peroxide-inducible genes activator | 0.19 | OHPLBJKB_00676 | | Sensor protein QseC | low | > 73 |
| Escherichia coli ECRC62 | 0.41 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.20 | BNILDI_00860 | qseC | two-component system sensor histidine kinase QseC | low | > 75 |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | 0.20 | HEPCGN_17735 | qseC | two-component system sensor histidine kinase QseC | low | > 87 |
| Escherichia fergusonii Becca | 0.41 | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | 0.19 | EFB2_00787 | | Sensor protein QseC | 0.49 | 43 |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS04365 | | LysR family transcriptional regulator | 0.17 | BWI76_RS24340 | | two-component sensor histidine kinase | low | > 92 |
| Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS17035 | | LysR family transcriptional regulator | 0.18 | ABZR86_RS01265 | | ATP-binding protein | — | — |
| Rahnella sp. WP5 | 0.30 | EX31_RS20145 | | LysR family transcriptional regulator | 0.21 | EX31_RS03270 | | two-component system sensor histidine kinase QseC | low | > 89 |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS12195 | | LysR family transcriptional regulator | 0.22 | RPSI07_RS07285 | | two-component sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.29 | RS_RS12720 | | LysR family transcriptional regulator | 0.22 | RS_RS24585 | | two-component sensor histidine kinase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS05100 | | LysR family transcriptional regulator | 0.22 | RALBFv3_RS16420 | | two-component sensor histidine kinase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS08525 | | LysR family transcriptional regulator | 0.22 | UW163_RS17160 | | two-component sensor histidine kinase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.28 | GFF2038 | | LysR family transcriptional regulator YfeR | 0.17 | GFF3139 | | Sensory histidine kinase QseC | low | > 78 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_18415 | | LysR family transcriptional regulator | 0.19 | IAI46_21230 | | two-component system sensor histidine kinase QseC | low | > 86 |
| Escherichia coli BL21 | 0.24 | ECD_02308 | | transcriptional regulator of yefH | 0.19 | ECD_02898 | | quorum sensing sensory histidine kinase in two-component regulatory system with QseB | low | > 61 |
| Castellaniella sp019104865 MT123 | 0.22 | ABCV34_RS13660 | | LysR family transcriptional regulator | 0.17 | ABCV34_RS11765 | | ATP-binding protein | low | > 48 |
| Marinobacter adhaerens HP15 | 0.19 | HP15_4145 | | transcriptional regulator, LysR family | 0.22 | HP15_3967 | | integral membrane sensor signal transduction histidine kinase | low | > 73 |
Not shown: 17 genomes with orthologs for Psyr_3165 only; 14 genomes with orthologs for Psyr_3512 only