Conservation of cofitness between Psyr_1728 and Psyr_3485 in Pseudomonas syringae pv. syringae B728a

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1728 tRNA--hydroxylase 1.0 Psyr_3485 MCP methyltransferase, CheR-type 0.37 2
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1728 tRNA--hydroxylase 1.00 Psyr_3485 MCP methyltransferase, CheR-type low > 86
Pseudomonas stutzeri RCH2 0.74 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.81 Psest_2969 Methylase of chemotaxis methyl-accepting proteins low > 67
Pseudomonas aeruginosa MRSN321 0.69 DY961_RS20645 tRNA-(ms[2]io[6]A)-hydroxylase 0.84 DY961_RS00120 cheR;inference=COORDINATES protein-glutamate O-methyltransferase CheR low > 100
Pseudomonas aeruginosa PA14 0.68 IKLFDK_08660 tRNA-(ms[2]io[6]A)-hydroxylase 0.84 IKLFDK_17165 chemotaxis protein methyltransferase low > 98
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS54725 tRNA-(ms[2]io[6]A)-hydroxylase 0.84 DQ20_RS40890 cheR;inference=COORDINATES protein-glutamate O-methyltransferase CheR low > 101
Pseudomonas sp. S08-1 0.67 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase 0.86 OH686_02980 Chemotaxis protein methyltransferase CheR low > 80
Pseudomonas sp. SVBP6 0.64 COO64_RS09940 tRNA-(ms[2]io[6]A)-hydroxylase 0.91 COO64_RS21405 cheR protein-glutamate O-methyltransferase CheR low > 93
Pseudomonas sp. DMC3 0.64 GFF1701 hypothetical protein 0.94 GFF4851 Chemotaxis protein methyltransferase Cher2 low > 89
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_22955 tRNA hydroxylase 0.93 AO353_02865 chemotaxis protein low > 101
Pseudomonas sp. BP01 0.64 JOY50_RS12775 tRNA-(ms[2]io[6]A)-hydroxylase 0.88 JOY50_RS00800 cheR protein-glutamate O-methyltransferase CheR low > 84
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.91 PfGW456L13_2000 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 87
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_24405 tRNA hydroxylase 0.93 AO356_18910 chemotaxis protein 0.31 34
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.91 Pf1N1B4_3471 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 87
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS17005 tRNA hydroxylase 0.90 PFLU_RS23185 protein-glutamate O-methyltransferase CheR low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS17005 tRNA hydroxylase 0.90 PFLU_RS23185 protein-glutamate O-methyltransferase CheR low > 109
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.92 Pf6N2E2_5693 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 103
Pseudomonas putida KT2440 0.63 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase 0.88 PP_4392 chemotaxis protein methyltransferase low > 96
Pseudomonas simiae WCS417 0.63 PS417_14975 tRNA hydroxylase 0.90 PS417_21575 chemotaxis protein low > 88
Pseudomonas sp. RS175 0.63 PFR28_02373 hypothetical protein 0.93 PFR28_03255 Chemotaxis protein methyltransferase Cher2 low > 88
Pseudomonas orientalis W4I3 0.63 QF045_RS14985 tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE 0.90 QF045_RS23660 protein-glutamate O-methyltransferase CheR low > 93
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_03299 hypothetical protein 0.89 GEMAOFIL_04458 Chemotaxis protein methyltransferase Cher2 low > 96
Pseudomonas segetis P6 0.59 ACVTMO_RS11130 miaE tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE 0.83 ACVTMO_RS15700 cheR protein-glutamate O-methyltransferase CheR low > 75
Marinobacter adhaerens HP15 0.56 HP15_2202 tRNA-(ms(2)io(6)a)-hydroxylase 0.59 HP15_1548 chemotaxis protein methyltransferase CheR low > 73
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1015 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.20 B158DRAFT_0184 Methylase of chemotaxis methyl-accepting proteins low > 40
Shewanella loihica PV-4 0.42 Shew_2514 tRNA--hydroxylase (RefSeq) 0.52 Shew_1344 MCP methyltransferase, CheR-type (RefSeq) low > 60
Shewanella oneidensis MR-1 0.39 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) 0.53 SO3251 cheR-2 chemotaxis protein methyltransferase CheR (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.39 Sama_1218 tRNA-hydroxylase (RefSeq) 0.53 Sama_2319 protein-glutamate O-methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.38 Shewana3_2667 tRNA hydroxylase (RefSeq) 0.53 Shewana3_1320 MCP methyltransferase, CheR-type (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.38 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 0.53 MIT1002_01038 Chemotaxis protein methyltransferase low > 70
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 0.50 CSW01_11230 chemotaxis protein methyltransferase 1 low > 62

Not shown: 19 genomes with orthologs for Psyr_1728 only; 13 genomes with orthologs for Psyr_3485 only