Conservation of cofitness between Psyr_0358 and Psyr_3134 in Pseudomonas syringae pv. syringae B728a

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 1.0 Psyr_3134 General substrate transporter:Major facilitator superfamily 0.32 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 1.00 Psyr_3134 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_444 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.50 PfGW456L13_4479 Sialic acid transporter (permease) NanT low > 87
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1693 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.51 Pf1N1B4_487 Sialic acid transporter (permease) NanT low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_11675 cystine transporter subunit 0.83 AO353_28375 MFS transporter low > 101
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3919 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.77 Pf6N2E2_1505 Transporter, MFS superfamily low > 103
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_10235 cystine transporter subunit 0.84 AO356_23960 MFS transporter low > 104
Pseudomonas sp. RS175 0.73 PFR28_04855 L-cystine-binding protein FliY 0.83 PFR28_02310 Putative niacin/nicotinamide transporter NaiP low > 88
Pseudomonas putida KT2440 0.70 PP_0227 periplasmic cystine-binding protein 0.82 PP_1698 Major facilitator family transporter low > 96
Serratia liquefaciens MT49 0.66 IAI46_15770 cystine ABC transporter substrate-binding protein 0.21 IAI46_20310 MFS transporter low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1692 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.15 GFF4251 Putative metabolite transport protein low > 78
Escherichia coli BW25113 0.65 b1920 fliY cystine transporter subunit (NCBI) 0.15 b4279 yjhB putative transport protein (VIMSS) low > 76
Escherichia coli ECOR38 0.65 HEPCGN_04145 tcyJ cystine ABC transporter substrate-binding protein 0.15 HEPCGN_09915 yjhB MFS transporter low > 87
Pantoea sp. MT58 0.64 IAI47_08175 cystine ABC transporter substrate-binding protein 0.22 IAI47_00210 MFS transporter low > 76
Rahnella sp. WP5 0.64 EX31_RS09435 cystine ABC transporter substrate-binding protein 0.23 EX31_RS13075 MFS transporter low > 89
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10775 cysteine ABC transporter substrate-binding protein 0.68 HSERO_RS22985 MFS transporter low > 78
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS08560 cysteine ABC transporter substrate-binding protein 0.63 BPHYT_RS35390 MFS transporter low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00742 amino acid ABC transporter substrate-binding protein, PAAT family 0.64 H281DRAFT_06388 Sugar phosphate permease low > 103
Paraburkholderia graminis OAS925 0.37 ABIE53_001953 cystine transport system substrate-binding protein 0.63 ABIE53_004971 MFS family permease low > 113
Rhizobium sp. OAE497 0.35 ABIE40_RS18760 amino acid ABC transporter substrate-binding protein 0.21 ABIE40_RS10835 MFS transporter low > 107
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS05410 amino acid ABC transporter substrate-binding protein 0.61 QEN71_RS11520 MFS transporter low > 153
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04395 cysteine ABC transporter substrate-binding protein 0.38 RR42_RS10015 4-methylmuconolactone transporter low > 128
Dickeya dianthicola 67-19 0.32 HGI48_RS01265 amino acid ABC transporter substrate-binding protein 0.13 HGI48_RS20320 MFS transporter 0.51 3
Dickeya dianthicola ME23 0.32 DZA65_RS01310 amino acid ABC transporter substrate-binding protein 0.13 DZA65_RS21360 MFS transporter low > 75
Dickeya dadantii 3937 0.31 DDA3937_RS01285 amino acid ABC transporter substrate-binding protein 0.13 DDA3937_RS20175 MFS transporter low > 74
Variovorax sp. SCN45 0.27 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) 0.23 GFF121 Uncharacterized MFS-type transporter low > 127
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS00675 glutamine ABC transporter substrate-binding protein 0.63 ABZR87_RS17190 MFS transporter low > 80
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS22445 amino acid ABC transporter substrate-binding protein 0.64 RALBFv3_RS22330 MFS transporter low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS22990 amino acid ABC transporter substrate-binding protein 0.64 UW163_RS22875 MFS transporter — —
Ralstonia solanacearum PSI07 0.23 RPSI07_RS01835 amino acid ABC transporter substrate-binding protein 0.62 RPSI07_RS00860 MFS transporter low > 81
Ralstonia solanacearum GMI1000 0.21 RS_RS19470 amino acid ABC transporter substrate-binding protein 0.62 RS_RS18280 MFS transporter low > 80

Not shown: 36 genomes with orthologs for Psyr_0358 only; 10 genomes with orthologs for Psyr_3134 only