Conservation of cofitness between Psyr_1655 and Psyr_2741 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1655 TatD-related deoxyribonuclease 1.0 Psyr_2741 Beta-lactamase 0.40 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1655 TatD-related deoxyribonuclease 1.00 Psyr_2741 Beta-lactamase low > 86
Pseudomonas sp. RS175 0.89 PFR28_03002 putative metal-dependent hydrolase YcfH 0.36 PFR28_02010 Esterase EstB low > 88
Pseudomonas putida KT2440 0.85 PP_1967 tRNA D-aminoacylase 0.11 PP_1954 conserved protein of unknown function 0.12 84
Serratia liquefaciens MT49 0.49 IAI46_09825 metal-dependent hydrolase 0.36 IAI46_12110 beta-lactamase family protein low > 86
Rahnella sp. WP5 0.49 EX31_RS24470 metal-dependent hydrolase 0.36 EX31_RS20710 serine hydrolase low > 89
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS10885 DNAase 0.35 RR42_RS26570 serine hydrolase low > 128
Pectobacterium carotovorum WPP14 0.47 HER17_RS08685 metal-dependent hydrolase 0.34 HER17_RS03310 serine hydrolase low > 75
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS12460 TatD family hydrolase 0.19 ABZR87_RS22500 serine hydrolase domain-containing protein low > 80
Escherichia coli ECRC100 0.45 OKFHMN_03540 ycfH metal-dependent hydrolase 0.08 OKFHMN_22125 pbp4b penicillin binding protein PBP4B low > 80
Escherichia coli BW25113 0.45 b1100 ycfH predicted metallodependent hydrolase (NCBI) 0.09 b2430 b2430 putative beta-lactamase (VIMSS) low > 76
Escherichia coli ECRC98 0.45 JDDGAC_07200 ycfH metal-dependent hydrolase 0.08 JDDGAC_26075 pbp4b penicillin binding protein PBP4B low > 86
Escherichia coli ECOR27 0.45 NOLOHH_21070 ycfH metal-dependent hydrolase 0.09 NOLOHH_13805 pbp4b penicillin binding protein PBP4B — —
Escherichia coli ECRC101 0.45 MCAODC_22900 ycfH metal-dependent hydrolase 0.08 MCAODC_12655 pbp4b penicillin binding protein PBP4B 0.50 56
Escherichia coli ECRC99 0.45 KEDOAH_24215 ycfH metal-dependent hydrolase 0.08 KEDOAH_06095 pbp4b penicillin binding protein PBP4B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH 0.09 OHPLBJKB_01293 hypothetical protein low > 73
Escherichia coli ECOR38 0.45 HEPCGN_23940 ycfH metal-dependent hydrolase 0.09 HEPCGN_21300 pbp4b penicillin binding protein PBP4B low > 87
Escherichia coli ECRC102 0.45 NIAGMN_24290 ycfH metal-dependent hydrolase 0.08 NIAGMN_19895 pbp4b penicillin binding protein PBP4B — —
Escherichia coli ECRC62 0.45 BNILDI_19230 ycfH metal-dependent hydrolase 0.09 BNILDI_12670 pbp4b penicillin binding protein PBP4B low > 75
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00931 TatD DNase family protein 0.19 H281DRAFT_03544 CubicO group peptidase, beta-lactamase class C family low > 103
Paraburkholderia graminis OAS925 0.42 ABIE53_002166 TatD DNase family protein 0.20 ABIE53_004711 CubicO group peptidase (beta-lactamase class C family) low > 113
Azospirillum brasilense Sp245 0.42 AZOBR_RS08795 LuxR family transcriptional regulator 0.33 AZOBR_RS21025 beta-lactamase low > 97
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS21805 TatD family hydrolase 0.19 QEN71_RS17145 serine hydrolase domain-containing protein low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS09640 DNAase 0.19 BPHYT_RS34325 beta-lactamase low > 109
Azospirillum sp. SherDot2 0.42 MPMX19_01469 putative metal-dependent hydrolase YcfH 0.34 MPMX19_06918 Esterase EstB low > 112
Rhodopseudomonas palustris CGA009 0.41 TX73_014390 TatD family hydrolase 0.19 TX73_011080 serine hydrolase low > 86
Phaeobacter inhibens DSM 17395 0.40 PGA1_c07990 putative hydrolase, TatD family 0.21 PGA1_c15670 putative beta-lactamase low > 62
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0126 hydrolase, TatD family 0.18 Ga0059261_0836 Beta-lactamase class C and other penicillin binding proteins low > 68
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2488 Putative deoxyribonuclease YcfH 0.20 Ac3H11_2935 Beta-lactamase class C and other penicillin binding proteins low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4665 Putative deoxyribonuclease YcfH 0.09 GFF5055 beta-lactamase low > 90
Dinoroseobacter shibae DFL-12 0.35 Dshi_0920 hydrolase, TatD family (RefSeq) 0.09 Dshi_2284 beta-lactamase (RefSeq) low > 64
Marinobacter adhaerens HP15 0.31 HP15_3420 hydrolase, TatD family 0.18 HP15_986 beta-lactamase low > 73
Caulobacter crescentus NA1000 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.19 CCNA_03294 beta-lactamase family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.19 CCNA_03294 beta-lactamase family protein low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS21615 TatD family hydrolase 0.20 ABZR88_RS02905 serine hydrolase low > 71

Not shown: 54 genomes with orthologs for Psyr_1655 only; 2 genomes with orthologs for Psyr_2741 only