Conservation of cofitness between PfGW456L13_4398 and PfGW456L13_3909 in Pseudomonas fluorescens GW456-L13

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_4398 Xanthine transporter,putative 1.0 PfGW456L13_3909 Ribose operon repressor 0.51 1
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3561 Xanthine transporter,putative 0.94 Pf1N1B4_6032 Ribose operon repressor low > 87
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_18565 MFS transporter 0.91 AO353_20830 LacI family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.83 PFR28_03309 putative MFS-type transporter YhhS 0.90 PFR28_02734 Ribose operon repressor low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_18540 MFS transporter 0.91 AO356_00955 LacI family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_5635 Xanthine transporter,putative 0.90 Pf6N2E2_164 Ribose operon repressor low > 103
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS23850 MFS transporter 0.85 PFLU_RS20365 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS23850 MFS transporter 0.85 PFLU_RS20365 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.77 PS417_22225 MFS transporter 0.84 PS417_18390 LacI family transcriptional regulator low > 88
Pseudomonas putida KT2440 0.75 PP_4492 carbohydrate efflux transporter 0.76 PP_2457 DNA-binding transcriptional repressor low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3578 Major facilitator superfamily 0.76 Psyr_2154 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3578 Major facilitator superfamily 0.76 Psyr_2154 transcriptional regulator, LacI family low > 86
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS26090 MFS transporter 0.66 QEN71_RS07355 LacI family DNA-binding transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS03860 MFS transporter 0.64 BPHYT_RS11205 LacI family transcription regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04751 Predicted arabinose efflux permease, MFS family 0.65 H281DRAFT_05228 transcriptional regulator, LacI family low > 103
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS02150 MFS transporter 0.49 HSERO_RS11495 LacI family transcription regulator low > 78
Dickeya dianthicola ME23 0.48 DZA65_RS21805 MFS transporter 0.38 DZA65_RS13140 HTH-type transcriptional repressor PurR low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS20795 MFS transporter 0.38 HGI48_RS12685 HTH-type transcriptional repressor PurR low > 71
Rahnella sp. WP5 0.47 EX31_RS13530 MFS transporter 0.38 EX31_RS06195 ribose operon transcriptional repressor RbsR low > 89
Pectobacterium carotovorum WPP14 0.47 HER17_RS00420 MFS transporter 0.37 HER17_RS09235 HTH-type transcriptional repressor PurR low > 75
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS16515 MFS transporter 0.28 ABZR86_RS01690 LacI family DNA-binding transcriptional regulator low > 74
Dickeya dadantii 3937 0.46 DDA3937_RS00595 MFS transporter 0.38 DDA3937_RS12620 HTH-type transcriptional repressor PurR low > 74
Enterobacter sp. TBS_079 0.46 MPMX20_04353 putative MFS-type transporter YhhS 0.36 MPMX20_04614 Ribose operon repressor low > 85
Escherichia coli BW25113 0.46 b3473 yhhS putative transport (VIMSS) 0.37 b3753 rbsR DNA-binding transcriptional repressor of ribose metabolism (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_03322 putative arabinose efflux transporter 0.37 ECD_03639 transcriptional repressor of ribose metabolism low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00230 putative MFS-type transporter YhhS 0.36 OHPLBJKB_02066 HTH-type transcriptional repressor PurR low > 73
Escherichia coli ECOR27 0.45 NOLOHH_08460 yhhS Uncharacterized MFS-type transporter YhhS 0.37 NOLOHH_06860 rbsR ribose operon transcriptional repressor RbsR low > 75
Escherichia coli ECRC101 0.45 MCAODC_07185 yhhS Uncharacterized MFS-type transporter YhhS 0.37 MCAODC_05230 rbsR ribose operon transcriptional repressor RbsR low > 87
Enterobacter asburiae PDN3 0.45 EX28DRAFT_4109 Arabinose efflux permease 0.37 EX28DRAFT_4029 transcriptional regulator, LacI family low > 76
Escherichia fergusonii Becca 0.45 EFB2_00343 putative MFS-type transporter YhhS 0.37 EFB2_04880 Ribose operon repressor low > 86
Escherichia coli ECRC99 0.45 KEDOAH_11485 yhhS Uncharacterized MFS-type transporter YhhS 0.37 KEDOAH_13425 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS19855 MFS transporter 0.37 ECOLIN_RS21575 ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC98 0.45 JDDGAC_20285 yhhS Uncharacterized MFS-type transporter YhhS 0.37 JDDGAC_18345 rbsR ribose operon transcriptional repressor RbsR low > 86
Escherichia coli ECOR38 0.45 HEPCGN_15485 yhhS Uncharacterized MFS-type transporter YhhS 0.37 HEPCGN_13435 rbsR ribose operon transcriptional repressor RbsR low > 87
Escherichia coli ECRC62 0.45 BNILDI_03055 yhhS Uncharacterized MFS-type transporter YhhS 0.37 BNILDI_04665 rbsR ribose operon transcriptional repressor RbsR low > 75
Escherichia coli ECRC102 0.45 NIAGMN_14425 yhhS Uncharacterized MFS-type transporter YhhS 0.37 NIAGMN_12480 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC100 0.45 OKFHMN_16655 yhhS Uncharacterized MFS-type transporter YhhS 0.37 OKFHMN_14725 rbsR ribose operon transcriptional repressor RbsR low > 80
Pantoea sp. MT58 0.45 IAI47_13425 MFS transporter 0.38 IAI47_00375 ribose operon transcriptional repressor RbsR low > 76
Klebsiella michiganensis M5al 0.45 BWI76_RS26445 MFS transporter 0.37 BWI76_RS00295 transcriptional regulator RbsR low > 92

Not shown: 0 genomes with orthologs for PfGW456L13_4398 only; 49 genomes with orthologs for PfGW456L13_3909 only