Conservation of cofitness between Pf6N2E2_2785 and Pf6N2E2_5366 in Pseudomonas fluorescens FW300-N2E2

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 1.0 Pf6N2E2_5366 DNA-binding heavy metal response regulator 0.35 2
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_04690 16S rRNA pseudouridine(516) synthase 1.00 AO356_17205 transcriptional regulator low > 104
Pseudomonas sp. RS175 0.92 PFR28_00665 Ribosomal small subunit pseudouridine synthase A 0.96 PFR28_03578 Transcriptional activator protein CzcR low > 88
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_17535 16S rRNA pseudouridine(516) synthase 0.95 AO353_15395 transcriptional regulator low > 101
Pseudomonas fluorescens SBW25 0.84 PFLU_RS07085 pseudouridine synthase 0.94 PFLU_RS04765 heavy metal response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS07085 pseudouridine synthase 0.94 PFLU_RS04765 heavy metal response regulator transcription factor low > 109
Pseudomonas simiae WCS417 0.84 PS417_07010 pseudouridine synthase 0.93 PS417_04690 transcriptional regulator low > 88
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.95 PfGW456L13_1663 DNA-binding heavy metal response regulator low > 87
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_3981 ribosomal small subunit pseudouridine synthase A 0.90 Psyr_1127 Heavy metal response regulator low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_3981 ribosomal small subunit pseudouridine synthase A 0.90 Psyr_1127 Heavy metal response regulator low > 86
Pseudomonas putida KT2440 0.70 PP_1409 ribosomal small subunit pseudouridine synthase A 0.57 PP_1438 response regulator low > 96
Pseudomonas stutzeri RCH2 0.62 Psest_3049 pseudouridine synthase 0.57 Psest_0611 heavy metal response regulator low > 67
Rahnella sp. WP5 0.42 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.59 EX31_RS18870 heavy metal response regulator transcription factor low > 89
Pectobacterium carotovorum WPP14 0.41 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA 0.70 HER17_RS13650 heavy metal response regulator transcription factor low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.57 DDA3937_RS01140 heavy metal response regulator transcription factor low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.55 GFF3273 Putative two-component system response regulator YedW low > 78
Serratia liquefaciens MT49 0.40 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.70 IAI46_16745 heavy metal response regulator transcription factor low > 86
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS15880 pseudouridine synthase 0.60 RR42_RS31535 transcriptional regulator low > 128
Ralstonia solanacearum UW163 0.26 UW163_RS00960 16S rRNA pseudouridine(516) synthase 0.61 UW163_RS22425 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase 0.61 RALBFv3_RS21280 DNA-binding response regulator low > 76
Fusobacterium nucleatum SB010 0.26 HUW76_04445 rRNA pseudouridine synthase 0.42 HUW76_07205 response regulator transcription factor low > 35
Ralstonia solanacearum PSI07 0.26 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase 0.61 RPSI07_RS01875 DNA-binding response regulator low > 81
Paraburkholderia graminis OAS925 0.25 ABIE53_003276 16S rRNA pseudouridine516 synthase 0.71 ABIE53_005209 two-component system copper resistance phosphate regulon response regulator CusR low > 113
Ralstonia solanacearum GMI1000 0.25 RS_RS03390 16S rRNA pseudouridine(516) synthase 0.61 RS_RS19510 DNA-binding response regulator low > 80
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) 0.73 H281DRAFT_01441 two component heavy metal response transcriptional regulator, winged helix family low > 103
Variovorax sp. SCN45 0.24 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.74 GFF5812 DNA-binding heavy metal response regulator low > 127
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS08605 pseudouridine synthase 0.60 ABZR87_RS21725 heavy metal response regulator transcription factor low > 80
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS15560 pseudouridine synthase 0.72 BPHYT_RS29120 transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS03150 16S rRNA pseudouridine(516) synthase 0.70 QEN71_RS32640 heavy metal response regulator transcription factor low > 153
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS08590 pseudouridine synthase 0.76 HSERO_RS12420 transcriptional regulator low > 78

Not shown: 40 genomes with orthologs for Pf6N2E2_2785 only; 13 genomes with orthologs for Pf6N2E2_5366 only