Conservation of cofitness between Pf1N1B4_3491 and Pf1N1B4_5999 in Pseudomonas fluorescens FW300-N1B4

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 1.0 Pf1N1B4_5999 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.25 15
Pseudomonas fluorescens FW300-N2E3 0.99 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.91 AO353_20995 transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.87 PfGW456L13_3163 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Escherichia coli ECRC100 0.70 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.29 OKFHMN_20855 aRO8 DNA-binding transcriptional regulator — —
Escherichia coli ECRC99 0.70 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.29 KEDOAH_07285 aRO8 DNA-binding transcriptional regulator — —
Escherichia coli ECOR38 0.70 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.28 HEPCGN_20050 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain low > 87
Escherichia coli ECRC101 0.70 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.29 MCAODC_11375 aRO8 DNA-binding transcriptional regulator low > 87
Escherichia coli ECRC102 0.70 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.29 NIAGMN_18620 aRO8 DNA-binding transcriptional regulator — —
Escherichia coli ECRC98 0.70 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.29 JDDGAC_24515 aRO8 DNA-binding transcriptional regulator low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA 0.29 ECOLIN_RS14900 PLP-dependent aminotransferase family protein — —
Dickeya dianthicola ME23 0.70 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA 0.30 DZA65_RS12410 PLP-dependent aminotransferase family protein low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA 0.30 HGI48_RS11865 PLP-dependent aminotransferase family protein low > 71
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA 0.35 ABZR86_RS20415 PLP-dependent aminotransferase family protein low > 74
Dickeya dadantii 3937 0.70 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 DDA3937_RS07555 PLP-dependent aminotransferase family protein low > 74
Pantoea sp. MT58 0.70 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA 0.29 IAI47_19480 PLP-dependent aminotransferase family protein low > 76
Marinobacter adhaerens HP15 0.70 HP15_2116 PP-loop domain protein 0.28 HP15_2761 transcriptional regulator, GntR family with aminotransferase domain protein low > 73
Escherichia fergusonii Becca 0.70 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase 0.29 EFB2_01257 HTH-type transcriptional regulatory protein GabR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.27 GFF1580 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 78
Pectobacterium carotovorum WPP14 0.69 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 HER17_RS09875 PLP-dependent aminotransferase family protein low > 75
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 ABZR87_RS05185 PLP-dependent aminotransferase family protein low > 80
Ralstonia solanacearum GMI1000 0.68 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 RS_RS00150 PLP-dependent aminotransferase family protein low > 80
Ralstonia solanacearum PSI07 0.68 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA 0.32 RPSI07_RS23800 PLP-dependent aminotransferase family protein low > 81
Rahnella sp. WP5 0.68 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 EX31_RS00090 PLP-dependent aminotransferase family protein low > 89
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA 0.33 RR42_RS16470 transcriptional regulator low > 128
Variovorax sp. SCN45 0.65 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.29 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 127
Variovorax sp. OAS795 0.65 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA 0.29 ABID97_RS18035 PLP-dependent aminotransferase family protein low > 91
Dechlorosoma suillum PS 0.64 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control 0.31 Dsui_2252 transcriptional regulator with HTH domain and aminotransferase domain low > 51
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA 0.32 HSERO_RS05425 decarboxylase low > 78
Castellaniella sp019104865 MT123 0.62 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA 0.28 ABCV34_RS01775 PLP-dependent aminotransferase family protein low > 48
Rhizobium sp. OAE497 0.49 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA 0.27 ABIE40_RS04930 PLP-dependent aminotransferase family protein low > 107
Phaeobacter inhibens DSM 17395 0.47 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA 0.29 PGA1_262p01530 transcriptional regulator, GntR family low > 62
Dinoroseobacter shibae DFL-12 0.46 Dshi_0330 PP-loop domain protein (RefSeq) 0.30 Dshi_0609 transcriptional regulator, GntR family with aminotransferase domain (RefSeq) 0.44 11
Fusobacterium nucleatum SB010 0.28 HUW76_05920 tRNA 2-thiocytidine(32) synthetase TtcA 0.22 HUW76_06045 PLP-dependent aminotransferase family protein low > 35

Not shown: 49 genomes with orthologs for Pf1N1B4_3491 only; 7 genomes with orthologs for Pf1N1B4_5999 only