Conservation of cofitness between PP_1824 and PP_5153 in Pseudomonas putida KT2440

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1824 Smr domain protein 1.0 PP_5153 putative isomerase/hydrolase 0.24 4
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5816 Smr domain protein 0.87 Pf6N2E2_3934 Fumarylacetoacetate hydrolase family protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_19510 DNA mismatch repair protein MutS 0.87 AO356_10310 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS21310 Smr/MutS family protein 0.83 PFLU_RS28685 fumarylacetoacetate hydrolase family protein low > 109
Pseudomonas fluorescens SBW25 0.86 PFLU_RS21310 Smr/MutS family protein 0.83 PFLU_RS28685 fumarylacetoacetate hydrolase family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_02280 DNA mismatch repair protein MutS 0.85 AO353_08500 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3774 Smr domain protein 0.85 Pf1N1B4_2275 Fumarylacetoacetate hydrolase family protein — —
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4172 Smr domain protein 0.85 PfGW456L13_945 Fumarylacetoacetate hydrolase family protein low > 87
Pseudomonas sp. RS175 0.85 PFR28_03132 putative DNA endonuclease SmrA 0.87 PFR28_04840 putative protein YcgM low > 88
Pseudomonas simiae WCS417 0.84 PS417_19345 DNA mismatch repair protein MutS 0.84 PS417_27030 hypothetical protein — —
Pseudomonas sp. S08-1 0.83 OH686_00650 Smr domain protein 0.75 OH686_11290 Fumarylacetoacetate hydrolase family protein low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_1993 Uncharacterized protein conserved in bacteria 0.78 Psest_3871 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.79 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.79 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase — —
Marinobacter adhaerens HP15 0.29 HP15_1255 protein containing Smr protein/MutS2 C-terminal domain 0.53 HP15_2550 fumarylacetoacetate hydrolase family protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_11330 DNA endonuclease SmrA 0.30 CSW01_19130 FAA hydrolase family protein low > 62
Alteromonas macleodii MIT1002 0.26 MIT1002_01029 putative DNA endonuclease SmrA 0.42 MIT1002_02584 Ureidoglycolate lyase low > 70
Rahnella sp. WP5 0.24 EX31_RS07180 DNA endonuclease SmrA 0.48 EX31_RS10565 fumarylacetoacetate hydrolase family protein low > 89
Dickeya dianthicola ME23 0.23 DZA65_RS12625 DNA endonuclease SmrA 0.47 DZA65_RS11575 fumarylacetoacetate hydrolase family protein low > 75
Dickeya dadantii 3937 0.23 DDA3937_RS12085 DNA endonuclease SmrA 0.48 DDA3937_RS11195 fumarylacetoacetate hydrolase family protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF2654 FIG00638524: hypothetical protein 0.48 GFF2814 FIG094199: Fumarylacetoacetate hydrolase low > 78
Klebsiella michiganensis M5al 0.22 BWI76_RS16155 hypothetical protein 0.48 BWI76_RS17770 isomerase/hydrolase — —
Serratia liquefaciens MT49 0.22 IAI46_19830 DNA endonuclease SmrA 0.47 IAI46_14500 fumarylacetoacetate hydrolase family protein low > 86
Escherichia coli Nissle 1917 0.22 ECOLIN_RS08040 DNA endonuclease SmrA 0.48 ECOLIN_RS07140 fumarylacetoacetate hydrolase family protein low > 52
Escherichia coli ECRC99 0.21 KEDOAH_26565 smrA DNA endonuclease SmrA 0.48 KEDOAH_25255 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECOR27 0.21 NOLOHH_19905 smrA DNA endonuclease SmrA 0.48 NOLOHH_20780 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia fergusonii Becca 0.21 EFB2_02588 putative DNA endonuclease SmrA 0.48 EFB2_02751 putative protein YcgM low > 86
Escherichia coli ECRC101 0.21 OKFHMN_02190 smrA DNA endonuclease SmrA 0.48 OKFHMN_28240 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC101 0.21 MCAODC_16065 smrA DNA endonuclease SmrA 0.48 MCAODC_21930 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECOR38 0.21 HEPCGN_25970 smrA DNA endonuclease SmrA 0.48 HEPCGN_24690 ycgM fumarylacetoacetate hydrolase family protein low > 85
Escherichia coli ECRC62 0.21 BNILDI_18055 smrA DNA endonuclease SmrA 0.48 BNILDI_18940 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC98 0.21 JDDGAC_04750 smrA DNA endonuclease SmrA 0.48 JDDGAC_06270 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC102 0.21 NIAGMN_26360 smrA DNA endonuclease SmrA 0.48 NIAGMN_27980 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli BW25113 0.21 b1340 ydaL hypothetical protein (NCBI) 0.48 b1180 ycgM predicted isomerase/hydrolase (NCBI) — —
Escherichia coli BL21 0.21 ECD_01317 DNA endonuclease 0.48 ECD_01155 putative isomerase/hydrolase low > 60
Shewanella loihica PV-4 0.21 Shew_2418 hypothetical protein (RefSeq) 0.31 Shew_1535 fumarylacetoacetate (FAA) hydrolase (RefSeq) low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02342 putative DNA endonuclease SmrA 0.48 OHPLBJKB_02511 putative protein YcgM low > 73
Pectobacterium carotovorum WPP14 0.21 HER17_RS06925 endonuclease SmrB 0.47 HER17_RS11245 fumarylacetoacetate hydrolase family protein low > 75
Enterobacter asburiae PDN3 0.21 EX28DRAFT_1533 Uncharacterized protein conserved in bacteria 0.47 EX28DRAFT_0760 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) low > 76
Enterobacter sp. TBS_079 0.20 MPMX20_02041 putative DNA endonuclease SmrA 0.47 MPMX20_02705 putative protein YcgM low > 85
Shewanella amazonensis SB2B 0.19 Sama_2161 hypothetical protein (RefSeq) 0.29 Sama_1093 fumarylacetoacetate (FAA) hydrolase (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.18 LU632_RS07765 smrB endonuclease SmrB 0.46 LU632_RS13105 fumarylacetoacetate hydrolase family protein low > 74
Dickeya dianthicola 67-19 0.18 HGI48_RS14540 endonuclease SmrB 0.47 HGI48_RS11230 fumarylacetoacetate hydrolase family protein low > 71

Not shown: 11 genomes with orthologs for PP_1824 only; 16 genomes with orthologs for PP_5153 only