Conservation of cofitness between PP_0586 and PP_4532 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0586 cadmium translocating P-type ATPase 1.0 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis 0.22 9
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_24 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.79 PfGW456L13_4451 ATP-dependent RNA helicase SrmB low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_06155 copper-transporting ATPase 0.77 AO353_18305 RNA helicase low > 101
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_3487 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.78 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB low > 103
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_08065 copper-transporting ATPase 0.78 AO356_04210 RNA helicase
Pseudomonas sp. RS175 0.78 PFR28_05244 Copper-exporting P-type ATPase 0.77 PFR28_00756 ATP-dependent RNA helicase RhlE low > 88
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1262 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.77 Pf1N1B4_543 ATP-dependent RNA helicase SrmB
Pseudomonas simiae WCS417 0.72 PS417_03160 metal ABC transporter ATPase 0.77 PS417_20275 RNA helicase
Pseudomonas stutzeri RCH2 0.72 Psest_0738 copper-(or silver)-translocating P-type ATPase 0.72 Psest_1627 Superfamily II DNA and RNA helicases low > 67
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS03240 copper-translocating P-type ATPase 0.76 PFLU_RS22195 DEAD/DEAH box helicase low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS03240 copper-translocating P-type ATPase 0.76 PFLU_RS22195 DEAD/DEAH box helicase low > 109
Pseudomonas sp. S08-1 0.68 OH686_07395 copper-translocating P-type ATPase 0.71 OH686_05415 ATP-dependent RNA helicase SrmB low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.78 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.78 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Shewanella amazonensis SB2B 0.46 Sama_1786 copper-translocating P-type ATPase (RefSeq) 0.34 Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq)
Serratia liquefaciens MT49 0.37 IAI46_13395 copper-translocating P-type ATPase 0.34 IAI46_19600 ATP-dependent RNA helicase SrmB low > 86
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1616 copper-(or silver)-translocating P-type ATPase 0.41 B158DRAFT_1312 Superfamily II DNA and RNA helicases low > 40
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2474 copper-(or silver)-translocating P-type ATPase 0.31 EX28DRAFT_0069 Superfamily II DNA and RNA helicases low > 76
Enterobacter sp. TBS_079 0.33 MPMX20_01084 Copper-exporting P-type ATPase 0.32 MPMX20_03447 ATP-dependent RNA helicase SrmB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4404 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.31 GFF2104 ATP-dependent RNA helicase SrmB low > 78
Escherichia coli ECRC100 0.32 OKFHMN_08075 copA copper-exporting P-type ATPase CopA 0.30 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB low > 80
Escherichia fergusonii Becca 0.32 EFB2_03575 Copper-exporting P-type ATPase 0.30 EFB2_01320 ATP-dependent RNA helicase SrmB low > 86
Escherichia coli ECRC98 0.32 JDDGAC_11720 copA copper-exporting P-type ATPase CopA 0.30 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB low > 86
Escherichia coli ECRC101 0.32 MCAODC_27295 copA copper-exporting P-type ATPase CopA 0.30 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB low > 87
Escherichia coli BW25113 0.32 b0484 copA copper transporter (NCBI) 0.30 b2576 srmB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECRC102 0.32 NIAGMN_06125 copA copper-exporting P-type ATPase CopA 0.30 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB
Escherichia coli BL21 0.32 ECD_00435 copper transporter 0.30 ECD_02470 ATP-dependent RNA helicase low > 61
Escherichia coli ECRC99 0.32 KEDOAH_19895 copA copper-exporting P-type ATPase CopA 0.30 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB
Pantoea sp. MT58 0.32 IAI47_14400 copper-exporting P-type ATPase CopA 0.34 IAI47_04835 ATP-dependent RNA helicase SrmB 0.32 23
Escherichia coli ECOR27 0.32 NOLOHH_01015 copA copper-exporting P-type ATPase CopA 0.30 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB low > 75
Escherichia coli Nissle 1917 0.32 ECOLIN_RS02865 copper-exporting P-type ATPase CopA 0.30 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB low > 55
Alteromonas macleodii MIT1002 0.32 MIT1002_00284 Copper-exporting P-type ATPase A 0.32 MIT1002_00941 ATP-dependent RNA helicase SrmB
Escherichia coli ECRC62 0.32 BNILDI_22435 copA copper-exporting P-type ATPase CopA 0.30 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03190 Copper-exporting P-type ATPase 0.30 OHPLBJKB_01131 ATP-dependent RNA helicase SrmB low > 73
Erwinia tracheiphila SCR3 0.32 LU632_RS15300 copA copper-exporting P-type ATPase CopA 0.33 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB low > 74
Shewanella loihica PV-4 0.31 Shew_3818 copper-translocating P-type ATPase (RefSeq) 0.33 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq)
Shewanella sp. ANA-3 0.31 Shewana3_4145 copper-translocating P-type ATPase (RefSeq) 0.34 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq)
Rahnella sp. WP5 0.31 EX31_RS22575 copper-exporting P-type ATPase CopA 0.32 EX31_RS21785 ATP-dependent RNA helicase SrmB low > 89
Pectobacterium carotovorum WPP14 0.30 HER17_RS15625 copper-exporting P-type ATPase CopA 0.32 HER17_RS05765 ATP-dependent RNA helicase SrmB 0.54 10
Shewanella oneidensis MR-1 0.30 SO1689 cation transport ATPase, E1-E2 family (NCBI ptt file) 0.35 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.30 DZA65_RS06225 copper-exporting P-type ATPase CopA 0.32 DZA65_RS16945 ATP-dependent RNA helicase SrmB low > 75

Not shown: 49 genomes with orthologs for PP_0586 only; 2 genomes with orthologs for PP_4532 only