Conservation of cofitness between PP_3745 and PP_2922 in Pseudomonas putida KT2440

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3745 glycolate oxidase, putative FAD-linked subunit 1.0 PP_2922 Urea amidolyase-related protein 0.15 15
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_01090 glycolate oxidase subunit GlcD 0.86 AO356_07585 allophanate hydrolase low > 104
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_3331 Glycolate oxidase subunit GlcD 0.84 Psyr_2720 Urea amidolyase-related protein 0.33 64
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_3331 Glycolate oxidase subunit GlcD 0.84 Psyr_2720 Urea amidolyase-related protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_21310 glycolate oxidase subunit GlcD 0.87 AO353_28800 allophanate hydrolase low > 101
Escherichia coli ECOR27 0.83 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 0.28 NOLOHH_23385 pxpC 5-oxoprolinase subunit PxpC low > 57
Escherichia fergusonii Becca 0.83 EFB2_00835 putative FAD-linked oxidoreductase 0.29 EFB2_03391 5-oxoprolinase subunit C low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_00727 putative FAD-linked oxidoreductase 0.29 OHPLBJKB_03005 putative protein YbgK low > 73
Escherichia coli ECRC62 0.83 BNILDI_00595 glcD glycolate oxidase subunit GlcD 0.28 BNILDI_21380 pxpC 5-oxoprolinase subunit PxpC — —
Escherichia coli BW25113 0.83 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 0.29 b0712 ybgK predicted enzyme subunit (NCBI) low > 76
Escherichia coli ECOR38 0.83 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 0.28 HEPCGN_01210 pxpC 5-oxoprolinase subunit PxpC low > 85
Escherichia coli Nissle 1917 0.82 ECOLIN_RS17140 glycolate oxidase subunit GlcD 0.29 ECOLIN_RS03810 5-oxoprolinase subunit PxpC — —
Escherichia coli BL21 0.82 ECD_02848 glycolate oxidase subunit, FAD-linked 0.29 ECD_00672 putative allophanate hydrolase, subunit 2 0.45 55
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS31645 FAD-binding protein 0.28 BPHYT_RS18630 allophanate hydrolase low > 109
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS19105 FAD-binding protein 0.68 HSERO_RS20560 allophanate hydrolase low > 78
Ralstonia solanacearum GMI1000 0.61 RS_RS13350 FAD-binding oxidoreductase 0.28 RS_RS10890 allophanate hydrolase low > 80
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS05490 FAD-binding oxidoreductase 0.28 RALBFv3_RS03430 allophanate hydrolase low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS08135 FAD-binding oxidoreductase 0.28 UW163_RS10240 allophanate hydrolase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01135 FAD-linked oxidase C-terminal domain-containing protein 0.29 ABZR87_RS15330 biotin-dependent carboxyltransferase family protein low > 80
Ralstonia solanacearum PSI07 0.61 RPSI07_RS11810 FAD-binding oxidoreductase 0.27 RPSI07_RS13785 allophanate hydrolase low > 81
Variovorax sp. OAS795 0.58 ABID97_RS03650 FAD-linked oxidase C-terminal domain-containing protein 0.29 ABID97_RS23845 biotin-dependent carboxyltransferase family protein low > 91
Variovorax sp. SCN45 0.58 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.29 GFF2323 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) — —
Azospirillum sp. SherDot2 0.54 MPMX19_00301 putative FAD-linked oxidoreductase 0.62 MPMX19_03380 5-oxoprolinase subunit C low > 112
Agrobacterium fabrum C58 0.44 Atu0665 glycolate oxidase subunit 0.21 Atu4276 hypothetical protein low > 89
Dinoroseobacter shibae DFL-12 0.44 Dshi_2896 FAD linked oxidase domain protein (RefSeq) 0.15 Dshi_2027 Allophanate hydrolase subunit 2 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.43 PGA1_c29720 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.16 PGA1_c28710 allophanate hydrolase, subunit 2 low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS06545 FAD-binding oxidoreductase 0.20 ABZR88_RS12610 biotin-dependent carboxyltransferase family protein low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_13425 FAD-binding oxidoreductase 0.30 CA264_08795 KipI antagonist low > 74
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_11750 Dimethylmenaquinone methyltransferase 0.22 OKGIIK_04735 AHS2 domain-containing protein low > 52
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS09620 FAD-binding oxidoreductase 0.20 CA265_RS10105 urea amidolyase low > 88
Lysobacter sp. OAE881 0.27 ABIE51_RS04670 FAD-linked oxidase C-terminal domain-containing protein 0.24 ABIE51_RS08140 biotin-dependent carboxyltransferase family protein low > 62
Mycobacterium tuberculosis H37Rv 0.27 Rv1257c Probable oxidoreductase 0.20 Rv0263c Conserved hypothetical protein low > 58
Fusobacterium nucleatum SB010 0.22 HUW76_09430 FAD-binding oxidoreductase 0.29 HUW76_07950 biotin-dependent carboxyltransferase family protein low > 35
Magnetospirillum magneticum AMB-1 0.21 AMB_RS15030 FAD-binding protein 0.24 AMB_RS15090 allophanate hydrolase low > 64
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.87 PFLU_RS09860 biotin-dependent carboxyltransferase low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.87 PFLU_RS09860 biotin-dependent carboxyltransferase low > 109

Not shown: 26 genomes with orthologs for PP_3745 only; 16 genomes with orthologs for PP_2922 only