Conservation of cofitness between PP_5279 and PP_2148 in Pseudomonas putida KT2440

23 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_5279		conserved protein of unknown function	1.0	PP_2148		transcription-repair coupling factor	0.72	2
Pseudomonas simiae WCS417	0.87	PS417_27750		transcriptional regulator	0.87	PS417_07635		transcription-repair coupling factor	low	> 88
Pseudomonas fluorescens FW300-N2E3	0.87	AO353_09200		transcriptional regulator	0.89	AO353_00435		transcription-repair coupling factor	low	> 101
Pseudomonas fluorescens SBW25-INTG	0.87	PFLU_RS29425		cupin domain-containing protein	0.87	PFLU_RS07710		transcription-repair coupling factor	low	> 109
Pseudomonas fluorescens SBW25	0.87	PFLU_RS29425		cupin domain-containing protein	0.87	PFLU_RS07710		transcription-repair coupling factor	low	> 109
Pseudomonas fluorescens FW300-N2E2	0.85	Pf6N2E2_4382		FIG00953403: hypothetical protein	0.89	Pf6N2E2_2278		Transcription-repair coupling factor	low	> 103
Pseudomonas fluorescens FW300-N2C3	0.84	AO356_12575		transcriptional regulator	0.89	AO356_02270		transcription-repair coupling factor	low	> 104
Pseudomonas fluorescens FW300-N1B4	0.84	Pf1N1B4_2130		FIG00953403: hypothetical protein	0.87	Pf1N1B4_3916		Transcription-repair coupling factor	low	> 87
Pseudomonas sp. RS175	0.84	PFR28_04408		hypothetical protein	0.89	PFR28_01123		Transcription-repair-coupling factor	low	> 88
Pseudomonas fluorescens GW456-L13	0.84	PfGW456L13_803		FIG00953403: hypothetical protein	0.87	PfGW456L13_4027		Transcription-repair coupling factor	low	> 87
Pseudomonas syringae pv. syringae B728a ΔmexB	0.81	Psyr_0226		Protein of unknown function DUF861	0.87	Psyr_1896		transcription-repair coupling factor	low	> 86
Pseudomonas syringae pv. syringae B728a	0.81	Psyr_0226		Protein of unknown function DUF861	0.87	Psyr_1896		transcription-repair coupling factor	low	> 86
Pseudomonas sp. S08-1	0.79	OH686_13640		Predicted enzyme of the cupin superfamily	0.84	OH686_21990		transcription-repair coupling factor	low	> 80
Burkholderia phytofirmans PsJN	0.69	BPHYT_RS32850		transcriptional regulator	0.49	BPHYT_RS09290		helicase	low	> 109
Shewanella loihica PV-4	0.65	Shew_0964		protein of unknown function DUF861, cupin_3 (RefSeq)	0.55	Shew_1630		transcription-repair coupling factor (RefSeq)	low	> 60
Shewanella sp. ANA-3	0.64	Shewana3_3108		protein of unknown function DUF861, cupin_3 (RefSeq)	0.55	Shewana3_2289		transcription-repair coupling factor (RefSeq)	low	> 73
Shewanella oneidensis MR-1	0.62	SO3501		conserved hypothetical protein (NCBI ptt file)	0.55	SO2255	mfd	transcription-repair coupling factor (NCBI ptt file)	low	> 76
Shewanella amazonensis SB2B	0.60	Sama_2651		hypothetical protein (RefSeq)	0.55	Sama_1330		transcription-repair coupling factor (RefSeq)	low	> 62
Azospirillum sp. SherDot2	0.38	MPMX19_00430		hypothetical protein	0.33	MPMX19_00876		Transcription-repair-coupling factor	low	> 112
Agrobacterium fabrum C58	0.35	Atu1253		hypothetical protein	0.33	Atu1778		transcription-repair coupling factor	low	> 89
Cupriavidus basilensis FW507-4G11	0.33	RR42_RS15290		cupin	0.48	RR42_RS07845		transcription-repair coupling factor	low	> 128
Herbaspirillum seropedicae SmR1	0.32	HSERO_RS11025		cupin	0.49	HSERO_RS15180		transcription-repair coupling factor	low	> 78
Dinoroseobacter shibae DFL-12	0.31	Dshi_1826		protein of unknown function DUF861 cupin_3 (RefSeq)	0.33	Dshi_1561		transcription-repair coupling factor (RefSeq)	low	> 64
Dechlorosoma suillum PS	0.24	Dsui_0795		putative enzyme of the cupin superfamily	0.48	Dsui_2385		transcription-repair coupling factor Mfd	low	> 51

Not shown: 1 genomes with orthologs for PP_5279 only; 64 genomes with orthologs for PP_2148 only