Conservation of cofitness between PP_1778 and PP_1805 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1778 Lipopolysaccharide ABC export system, permease protein 1.0 PP_1805 Polysaccharide biosynthesis protein 0.60 10
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_0917 ABC-2 0.75 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_0917 ABC-2 0.75 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_01190 Transport permease protein 0.28 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein low > 52
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.4513.1 O-antigen export system permease protein RfbD 0.24 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_2336 O-antigen export system permease protein RfbD 0.78 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11825 ABC transporter 0.75 AO356_03345 hypothetical protein 0.50 9
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_10255 ABC transporter 0.78 AO353_01970 hypothetical protein 0.39 23
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4240 O-antigen export system permease protein RfbD 0.74 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas sp. S08-1 0.37 OH686_11970 O-antigen export system permease protein RfbD 0.70 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Pseudomonas sp. RS175 0.36 PFR28_04556 hypothetical protein 0.75 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase 0.31 17
Paraburkholderia graminis OAS925 0.25 ABIE53_001154 lipopolysaccharide transport system permease protein 0.27 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase 0.31 62
Magnetospirillum magneticum AMB-1 0.24 AMB_RS05435 ABC transporter permease 0.25 AMB_RS00500 polysaccharide biosynthesis protein — —
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04827 lipopolysaccharide transport system permease protein 0.27 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS25730 ABC transporter permease 0.27 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Bosea sp. OAE506 0.23 ABIE41_RS03025 ABC transporter permease 0.16 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS21440 sugar ABC transporter permease 0.27 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase low > 109
Rhodanobacter denitrificans MT42 0.21 LRK55_RS05405 ABC transporter permease 0.26 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase low > 63
Pseudomonas simiae WCS417 0.20 PS417_20640 sugar ABC transporter permease 0.73 PS417_08190 membrane protein — —
Azospirillum sp. SherDot2 0.20 MPMX19_06721 hypothetical protein 0.24 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS18750 ABC transporter permease 0.26 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase — —
Phocaeicola dorei CL03T12C01 0.19 ABI39_RS13680 ABC transporter permease 0.23 ABI39_RS13770 polysaccharide biosynthesis protein low > 72
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS05655 ABC transporter permease 0.26 LRK54_RS18060 polysaccharide biosynthesis protein 0.75 44
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS01800 ABC transporter permease 0.25 CA265_RS19185 polysaccharide biosynthesis protein low > 88
Lysobacter sp. OAE881 0.17 ABIE51_RS04300 ABC transporter permease 0.25 ABIE51_RS09370 nucleoside-diphosphate sugar epimerase/dehydratase — —
Castellaniella sp019104865 MT123 0.17 ABCV34_RS12950 ABC transporter permease 0.26 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component 0.23 Echvi_0060 Predicted nucleoside-diphosphate sugar epimerases low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF1845 O-antigen export system, permease protein 0.43 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.97 15
Rhodospirillum rubrum S1H 0.14 Rru_B0027 ABC-2 (NCBI) 0.23 Rru_A3656 Polysaccharide biosynthesis protein CapD (NCBI) — —
Dickeya dadantii 3937 0.10 DDA3937_RS18670 ABC transporter permease 0.38 DDA3937_RS03410 polysaccharide biosynthesis protein 0.88 2

Not shown: 16 genomes with orthologs for PP_1778 only; 29 genomes with orthologs for PP_1805 only