Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_0937 | | endoribonuclease G (RNAse G) | 1.0 | PP_1803 | | UDP-sugar epimerase | 0.49 | 16 |
Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_05230 | | ribonuclease G | 0.62 | AO353_01980 | | NAD-dependent dehydratase | low | > 101 |
Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_07110 | | ribonuclease G | 0.36 | AO356_03355 | | hypothetical protein | low | > 104 |
Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_1095 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.54 | Pf1N1B4_339 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | low | > 87 |
Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_4159 | | RNAse G | 0.54 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_4159 | | RNAse G | 0.54 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
Pseudomonas sp. S08-1 | 0.89 | OH686_08595 | | Ribonuclease G | 0.53 | OH686_20905 | | UDP-glucose 4-epimerase | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.89 | Psest_3323 | | ribonuclease, Rne/Rng family | 0.55 | Psest_1823 | | Nucleoside-diphosphate-sugar epimerases | low | > 67 |
Marinobacter adhaerens HP15 | 0.68 | HP15_2451 | | ribonuclease, Rne/Rng family | 0.32 | HP15_2386 | | UDP-glucose 4-epimerase | low | > 73 |
Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS24430 | | ribonuclease G | 0.39 | QEN71_RS25600 | | SDR family oxidoreductase | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_04515 | | RNAse G | 0.39 | H281DRAFT_04849 | | UDP-glucose 4-epimerase | low | > 103 |
Paraburkholderia graminis OAS925 | 0.59 | ABIE53_001538 | | ribonuclease G | 0.39 | ABIE53_001161 | | nucleoside-diphosphate-sugar epimerase | low | > 113 |
Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS06375 | | ribonuclease | 0.42 | BPHYT_RS04375 | | epimerase | — | — |
Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS17790 | | ribonuclease | 0.54 | HSERO_RS02375 | | NAD-dependent dehydratase | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_02205 | | ribonuclease E/G | 0.50 | CSW01_01355 | | UDP-glucose 4-epimerase | low | > 62 |
Dickeya dadantii 3937 | 0.57 | DDA3937_RS01450 | | ribonuclease G | 0.45 | DDA3937_RS03415 | | NAD-dependent epimerase/dehydratase family protein | low | > 74 |
Dickeya dianthicola 67-19 | 0.57 | HGI48_RS01370 | | ribonuclease G | 0.44 | HGI48_RS03515 | | NAD-dependent epimerase/dehydratase family protein | low | > 71 |
Dickeya dianthicola ME23 | 0.57 | DZA65_RS01430 | | ribonuclease G | 0.44 | DZA65_RS03630 | | NAD-dependent epimerase/dehydratase family protein | low | > 75 |
Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3297 | | ribonuclease, Rne/Rng family | 0.36 | EX28DRAFT_0516 | | Nucleoside-diphosphate-sugar epimerases | low | > 76 |
Escherichia coli ECOR27 | 0.57 | NOLOHH_09530 | rng | ribonuclease G | 0.16 | NOLOHH_15730 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 57 |
Escherichia coli ECRC99 | 0.57 | KEDOAH_10405 | rng | ribonuclease G | 0.16 | KEDOAH_03750 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
Escherichia fergusonii Becca | 0.57 | EFB2_00584 | | Ribonuclease G | 0.12 | EFB2_00831 | | 2-alkyl-3-oxoalkanoate reductase | low | > 86 |
Escherichia coli ECRC101 | 0.57 | MCAODC_08265 | rng | ribonuclease G | 0.16 | MCAODC_20540 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
Escherichia coli ECRC101 | 0.57 | OKFHMN_17745 | rng | ribonuclease G | 0.16 | OKFHMN_24400 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
Escherichia coli ECRC98 | 0.57 | JDDGAC_21370 | rng | ribonuclease G | 0.16 | JDDGAC_28510 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18605 | | ribonuclease G | 0.12 | ECOLIN_RS17160 | | NAD-dependent epimerase/dehydratase family protein | 0.58 | 17 |
Escherichia coli ECOR38 | 0.57 | HEPCGN_16610 | rng | ribonuclease G | 0.12 | HEPCGN_17975 | wcaG | short-chain dehydrogenase | low | > 85 |
Escherichia coli ECRC62 | 0.57 | BNILDI_01990 | rng | ribonuclease G | 0.12 | BNILDI_00620 | wcaG | short-chain dehydrogenase | — | — |
Escherichia coli BL21 | 0.57 | ECD_03106 | | ribonuclease G | 0.12 | ECD_02852 | | hypothetical protein | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00458 | | Ribonuclease G | 0.12 | OHPLBJKB_00723 | | 2-alkyl-3-oxoalkanoate reductase | low | > 73 |
Escherichia coli ECRC102 | 0.57 | NIAGMN_15505 | rng | ribonuclease G | 0.16 | NIAGMN_22345 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
Shewanella oneidensis MR-1 | 0.56 | SO4094 | cafA | ribonuclease G (NCBI ptt file) | 0.44 | SO3173 | | UDP-galactose 4-epimerase, putative (NCBI ptt file) | low | > 76 |
Serratia liquefaciens MT49 | 0.56 | IAI46_22700 | | ribonuclease G | 0.14 | IAI46_15590 | | NAD-dependent epimerase/dehydratase family protein | low | > 86 |
Shewanella amazonensis SB2B | 0.56 | Sama_0471 | | ribonuclease G (RefSeq) | 0.25 | Sama_2249 | | hypothetical protein (RefSeq) | low | > 62 |
Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS02480 | | ribonuclease G | 0.34 | ABCV34_RS13025 | | NAD-dependent epimerase/dehydratase family protein | low | > 48 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF4531 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.48 | GFF1863 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | low | > 90 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS20445 | | Rne/Rng family ribonuclease | 0.16 | ABZR88_RS03025 | | NAD(P)-dependent oxidoreductase | — | — |
Not shown: 36 genomes with orthologs for PP_0937 only; 12 genomes with orthologs for PP_1803 only