Conservation of cofitness between PP_4364 and PP_1088 in Pseudomonas putida KT2440

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4364 putative Anti-sigma F factor antagonist 1.0 PP_1088 Argininosuccinate synthase 0.49 7
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3609 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV 0.96 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas simiae WCS417 0.80 PS417_19780 anti-anti-sigma factor 0.96 PS417_05640 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_03810 anti-anti-sigma factor 0.95 AO356_18325 argininosuccinate synthase 0.40 25
Pseudomonas fluorescens SBW25 0.77 PFLU_RS21750 STAS domain-containing protein 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS21750 STAS domain-containing protein 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_18705 anti-anti-sigma factor 0.95 AO353_04105 argininosuccinate synthase low > 101
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_4348 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV 0.96 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2588 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV 0.95 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas stutzeri RCH2 0.68 Psest_1724 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 0.95 Psest_3121 argininosuccinate synthase — —
Pseudomonas sp. S08-1 0.66 OH686_02810 Anti-sigma B factor antagonist RsbV 0.95 OH686_03930 argininosuccinate synthase low > 80
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_3452 Sulfate transporter/antisigma-factor antagonist STAS 0.95 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_3452 Sulfate transporter/antisigma-factor antagonist STAS 0.95 Psyr_3892 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.60 HP15_2321 anti-sigma-factor antagonist 0.82 HP15_2367 argininosuccinate synthase — —
Dechlorosoma suillum PS 0.45 Dsui_1714 anti-anti-sigma factor 0.79 Dsui_3248 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02925 spoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 0.20 OKGIIK_09465 argG argininosuccinate synthase low > 52
Rhodanobacter denitrificans MT42 0.43 LRK55_RS13420 STAS domain-containing protein 0.21 LRK55_RS02155 argininosuccinate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS13680 STAS domain-containing protein 0.21 LRK54_RS02400 argininosuccinate synthase low > 59
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS22195 STAS domain-containing protein 0.21 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.35 34
Alteromonas macleodii MIT1002 0.35 MIT1002_01319 Anti-anti-sigma-B factor 0.48 MIT1002_00468 Argininosuccinate synthase low > 70
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_19510 anti-sigma factor antagonist 0.48 CSW01_13370 argininosuccinate synthase low > 62
Magnetospirillum magneticum AMB-1 0.27 AMB_RS18390 anti-sigma factor antagonist 0.71 AMB_RS05720 argininosuccinate synthase — —
Shewanella oneidensis MR-1 0.27 SO2118 SpoIIAA family protein (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.25 AZOBR_RS12600 anti-sigma-factor antagonist 0.73 AZOBR_RS00785 argininosuccinate synthase — —

Not shown: 0 genomes with orthologs for PP_4364 only; 79 genomes with orthologs for PP_1088 only