Conservation of cofitness between PP_5279 and PP_0066 in Pseudomonas putida KT2440

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5279 conserved protein of unknown function 1.0 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.65 8
Pseudomonas simiae WCS417 0.87 PS417_27750 transcriptional regulator 0.83 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_09200 transcriptional regulator 0.83 AO353_10630 16S rRNA methyltransferase low > 101
Pseudomonas fluorescens SBW25 0.87 PFLU_RS29425 cupin domain-containing protein 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS29425 cupin domain-containing protein 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4382 FIG00953403: hypothetical protein 0.84 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_2130 FIG00953403: hypothetical protein 0.83 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_803 FIG00953403: hypothetical protein 0.83 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_12575 transcriptional regulator 0.84 AO356_11275 16S rRNA methyltransferase 0.23 32
Pseudomonas sp. RS175 0.84 PFR28_04408 hypothetical protein 0.83 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0226 Protein of unknown function DUF861 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0226 Protein of unknown function DUF861 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas sp. S08-1 0.79 OH686_13640 Predicted enzyme of the cupin superfamily 0.73 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS32850 transcriptional regulator 0.30 BPHYT_RS01475 16S rRNA methyltransferase low > 109
Shewanella loihica PV-4 0.65 Shew_0964 protein of unknown function DUF861, cupin_3 (RefSeq) 0.40 Shew_3738 sun protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_3108 protein of unknown function DUF861, cupin_3 (RefSeq) 0.41 Shewana3_0033 sun protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO3501 conserved hypothetical protein (NCBI ptt file) 0.40 SO0030 sun sun protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.60 Sama_2651 hypothetical protein (RefSeq) 0.41 Sama_0041 sun protein (RefSeq) low > 62
Azospirillum sp. SherDot2 0.38 MPMX19_00430 hypothetical protein 0.20 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B low > 112
Azospirillum brasilense Sp245 0.36 AZOBR_RS00120 cupin 0.21 AZOBR_RS00235 MFS transporter 0.26 60
Agrobacterium fabrum C58 0.35 Atu1253 hypothetical protein 0.20 Atu2825 Sun protein low > 89
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS15290 cupin 0.27 RR42_RS20450 16S rRNA methyltransferase low > 128
Dinoroseobacter shibae DFL-12 0.31 Dshi_1826 protein of unknown function DUF861 cupin_3 (RefSeq) 0.19 Dshi_3033 Fmu (Sun) domain protein (RefSeq) low > 64
Dechlorosoma suillum PS 0.24 Dsui_0795 putative enzyme of the cupin superfamily 0.33 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB low > 51

Not shown: 1 genomes with orthologs for PP_5279 only; 63 genomes with orthologs for PP_0066 only