Conservation of cofitness between PFLU_RS29215 and PFLU_RS25305 in Pseudomonas fluorescens SBW25

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS29215 response regulator transcription factor 1.0 PFLU_RS25305 dihydromonapterin reductase 0.92 11
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29215 response regulator transcription factor 1.00 PFLU_RS25305 dihydromonapterin reductase 0.25 94
Pseudomonas simiae WCS417 0.99 PS417_27535 chemotaxis protein CheY 0.94 PS417_23490 dihydrofolate reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_08995 chemotaxis protein CheY 0.83 AO353_04955 dihydrofolate reductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2184 Autolysis response regulater LytR 0.84 Pf1N1B4_1040 FolM Alternative dihydrofolate reductase 1 low > 87
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_855 Autolysis response regulater LytR 0.82 PfGW456L13_4977 FolM Alternative dihydrofolate reductase 1 low > 87
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4430 Autolysis response regulater LytR 0.79 Pf6N2E2_5274 FolM Alternative dihydrofolate reductase 1 low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_12785 chemotaxis protein CheY 0.80 AO356_16745 dihydrofolate reductase low > 104
Pseudomonas sp. RS175 0.86 PFR28_04366 Sensory transduction protein LytR 0.82 PFR28_00208 Dihydromonapterin reductase low > 88
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0063 Two-component response regulator AlgR 0.74 Psyr_1021 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0063 Two-component response regulator AlgR 0.74 Psyr_1021 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas stutzeri RCH2 0.80 Psest_3749 Response regulator of the LytR/AlgR family 0.70 Psest_3204 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 67
Pseudomonas putida KT2440 0.80 PP_0185 Positive alginate biosynthesis regulatory protein 0.37 PP_4632 dihydrofolate reductase / dihydromonapterin reductase low > 96
Pseudomonas sp. S08-1 0.77 OH686_13895 Alginate biosynthesis two-component system response regulator AlgR 0.73 OH686_18770 FolM Alternative dihydrofolate reductase 1 low > 80
Marinobacter adhaerens HP15 0.39 HP15_241 alginate biosynthesis regulatory protein AlgR-like protein 0.53 HP15_3719 short-chain dehydrogenase/reductase SDR low > 73
Shewanella sp. ANA-3 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) 0.40 Shewana3_3507 short chain dehydrogenase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.19 MIT1002_01189 Transcriptional regulatory protein YehT 0.47 MIT1002_03759 Dihydrofolate reductase FolM low > 70
Shewanella oneidensis MR-1 0.18 SO2823 response regulator (NCBI ptt file) 0.42 SO0772 oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.17 IAI46_23615 two-component system response regulator BtsR 0.43 IAI46_13295 dihydromonapterin reductase low > 86
Enterobacter sp. TBS_079 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR 0.44 MPMX20_02028 Dihydromonapterin reductase low > 85
Escherichia coli ECRC102 0.16 NIAGMN_21850 btsR two-component system response regulator BtsR 0.42 NIAGMN_00400 folM dihydromonapterin reductase — —
Escherichia coli ECOR27 0.16 NOLOHH_15235 btsR two-component system response regulator BtsR 0.42 NOLOHH_18180 folM dihydromonapterin reductase — —
Escherichia coli ECRC101 0.16 MCAODC_21245 btsR two-component system response regulator BtsR 0.42 MCAODC_17735 folM dihydromonapterin reductase low > 87
Escherichia coli Nissle 1917 0.16 ECOLIN_RS12450 two-component system response regulator BtsR 0.42 ECOLIN_RS08970 dihydromonapterin reductase — —
Escherichia fergusonii Becca 0.16 EFB2_01731 Transcriptional regulatory protein BtsR 0.42 EFB2_02386 Dihydromonapterin reductase low > 86
Escherichia coli BW25113 0.16 b2125 yehT orf, hypothetical protein (VIMSS) 0.42 b1606 folM short chain dehydrogenase (NCBI) low > 76
Escherichia coli ECRC98 0.16 JDDGAC_28005 btsR two-component system response regulator BtsR 0.42 JDDGAC_02265 folM dihydromonapterin reductase low > 86
Escherichia coli ECRC100 0.16 OKFHMN_23915 btsR two-component system response regulator BtsR 0.42 OKFHMN_27675 folM dihydromonapterin reductase — —
Escherichia coli BL21 0.16 ECD_02054 putative response regulator in two-component system withYehU 0.42 ECD_01575 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_01586 Transcriptional regulatory protein BtsR 0.42 OHPLBJKB_02120 Dihydromonapterin reductase low > 73
Escherichia coli ECRC99 0.16 KEDOAH_04250 btsR two-component system response regulator BtsR 0.42 KEDOAH_00430 folM dihydromonapterin reductase — —
Enterobacter asburiae PDN3 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family 0.47 EX28DRAFT_1547 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 76
Escherichia coli ECRC62 0.16 BNILDI_14185 btsR two-component system response regulator BtsR 0.42 BNILDI_16970 folM dihydromonapterin reductase low > 75
Pectobacterium carotovorum WPP14 0.16 HER17_RS05370 two-component system response regulator BtsR 0.45 HER17_RS09720 dihydromonapterin reductase low > 75
Escherichia coli ECOR38 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR 0.42 HEPCGN_06050 folM dihydromonapterin reductase low > 87
Klebsiella michiganensis M5al 0.16 BWI76_RS19470 DNA-binding response regulator 0.45 BWI76_RS16230 dihydromonapterin reductase low > 92
Azospirillum brasilense Sp245 0.15 AZOBR_RS22560 transcriptional regulator 0.34 AZOBR_RS00495 dihydrofolate reductase folM — —
Shewanella loihica PV-4 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) 0.44 Shew_0048 short chain dehydrogenase (RefSeq) low > 60

Not shown: 44 genomes with orthologs for PFLU_RS29215 only; 1 genomes with orthologs for PFLU_RS25305 only