Conservation of cofitness between PFLU_RS15475 and PFLU_RS24645 in Pseudomonas fluorescens SBW25

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.0 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.69 11
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.00 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.24 36
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3383 transcriptional regulator, TetR family 0.26 Ga0059261_1645 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 68
Serratia liquefaciens MT49 0.32 IAI46_07070 TetR/AcrR family transcriptional regulator 0.19 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 86
Sinorhizobium meliloti 1021 0.32 SM_b20455 transcriptional regulator 0.24 SMc02878 N-acetylglucosamine-6-phosphate deacetylase — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS02040 TetR family transcriptional regulator 0.24 AZOBR_RS11675 N-acetylglucosamine 6-phosphate deacetylase — —
Dickeya dianthicola 67-19 0.31 HGI48_RS05310 TetR/AcrR family transcriptional regulator 0.19 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Shewanella sp. ANA-3 0.30 Shewana3_1076 TetR family transcriptional regulator (RefSeq) 0.27 Shewana3_3112 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 73
Shewanella oneidensis MR-1 0.30 SO3494 transcriptional regulator, TetR family (NCBI ptt file) 0.26 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) — —
Enterobacter sp. TBS_079 0.29 MPMX20_01792 HTH-type transcriptional repressor ComR 0.31 MPMX20_04044 N-acetylgalactosamine-6-phosphate deacetylase low > 85
Escherichia coli BW25113 0.28 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.19 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Agrobacterium fabrum C58 0.28 Atu3075 TetR family transcriptional regulator 0.23 Atu2608 N-acetylglucosamine-6-phosphate deacetylase low > 89
Escherichia coli Nissle 1917 0.28 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR 0.29 ECOLIN_RS18050 N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02555 HTH-type transcriptional repressor ComR 0.29 OHPLBJKB_00566 N-acetylgalactosamine-6-phosphate deacetylase low > 73
Escherichia coli ECRC62 0.28 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR 0.19 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli ECOR27 0.28 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR 0.29 NOLOHH_10090 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli BL21 0.28 ECD_01107 repressor for bhsA(ycfR) 0.29 ECD_03002 N-acetylgalactosamine-6-phosphate deacetylase low > 61
Escherichia coli ECRC102 0.28 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR 0.29 NIAGMN_16070 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC99 0.28 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR 0.29 KEDOAH_09840 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC100 0.28 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR 0.29 OKFHMN_18310 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia coli ECRC98 0.28 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR 0.29 JDDGAC_21940 nagA N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli ECRC101 0.28 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR 0.29 MCAODC_08820 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECOR38 0.28 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.30 HEPCGN_17145 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia fergusonii Becca 0.27 EFB2_02864 HTH-type transcriptional repressor ComR 0.30 EFB2_00684 N-acetylgalactosamine-6-phosphate deacetylase low > 86
Pantoea sp. MT58 0.27 IAI47_09720 TetR/AcrR family transcriptional regulator 0.21 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1819 transcriptional regulator, TetR family 0.30 EX28DRAFT_3191 N-acetylglucosamine-6-phosphate deacetylase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_01426 transcriptional regulator, TetR family 0.67 H281DRAFT_01979 N-acetylglucosamine 6-phosphate deacetylase low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3394 putative transcriptional repressor 0.19 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 78
Klebsiella michiganensis M5al 0.26 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein 0.19 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Rahnella sp. WP5 0.26 EX31_RS23895 TetR/AcrR family transcriptional regulator 0.20 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89
Paraburkholderia graminis OAS925 0.24 ABIE53_002226 AcrR family transcriptional regulator 0.68 ABIE53_000689 N-acetylglucosamine-6-phosphate deacetylase low > 113
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS36215 TetR/AcrR family transcriptional regulator 0.68 QEN71_RS01585 N-acetylglucosamine-6-phosphate deacetylase low > 153
Rhizobium sp. OAE497 0.24 ABIE40_RS21315 TetR/AcrR family transcriptional regulator 0.20 ABIE40_RS18570 N-acetylglucosamine-6-phosphate deacetylase low > 107
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_28110 TetR family transcriptional regulator 0.92 AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 101
Shewanella loihica PV-4 0.16 Shew_2729 TetR family transcriptional regulator (RefSeq) 0.23 Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) — —
Dickeya dianthicola ME23 0.15 DZA65_RS22680 TetR/AcrR family transcriptional regulator 0.18 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase low > 75

Not shown: 4 genomes with orthologs for PFLU_RS15475 only; 33 genomes with orthologs for PFLU_RS24645 only