Conservation of cofitness between PFLU_RS14595 and PFLU_RS24155 in Pseudomonas fluorescens SBW25

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS14595 EAL domain-containing protein 1.0 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.64 2
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS14595 EAL domain-containing protein 1.00 PFLU_RS24155 putative 2-dehydropantoate 2-reductase low > 109
Pseudomonas simiae WCS417 0.90 PS417_14020 diguanylate phosphodiesterase 0.94 PS417_22515 2-dehydropantoate 2-reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26940 diguanylate phosphodiesterase 0.81 AO353_03645 2-dehydropantoate 2-reductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_5006 Rtn protein 0.80 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) low > 87
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2932 Rtn protein 0.81 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) low > 87
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_22830 diguanylate phosphodiesterase 0.76 AO356_17955 2-dehydropantoate 2-reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_452 Rtn protein 0.77 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.18 30
Pseudomonas putida KT2440 0.54 PP_3435 conserved protein of unknown function 0.65 PP_1351 putative 2-dehydropantoate 2-reductase low > 96
Rahnella sp. WP5 0.42 EX31_RS11005 EAL domain-containing protein 0.19 EX31_RS22180 2-dehydropantoate 2-reductase low > 89
Dickeya dianthicola ME23 0.30 DZA65_RS13535 EAL domain-containing protein 0.21 DZA65_RS05940 2-dehydropantoate 2-reductase low > 75
Dickeya dadantii 3937 0.30 DDA3937_RS13005 EAL domain-containing protein 0.21 DDA3937_RS05555 2-dehydropantoate 2-reductase low > 74
Dickeya dianthicola 67-19 0.30 HGI48_RS13070 EAL domain-containing protein 0.20 HGI48_RS05615 2-dehydropantoate 2-reductase low > 71
Enterobacter asburiae PDN3 0.29 EX28DRAFT_1790 FOG: EAL domain 0.24 EX28DRAFT_2546 2-dehydropantoate 2-reductase low > 76
Enterobacter sp. TBS_079 0.28 MPMX20_01826 putative cyclic di-GMP phosphodiesterase PdeG 0.26 MPMX20_01016 2-dehydropantoate 2-reductase low > 85
Klebsiella michiganensis M5al 0.26 BWI76_RS14100 diguanylate phosphodiesterase 0.22 BWI76_RS06405 2-dehydropantoate 2-reductase low > 92
Escherichia coli ECRC99 0.26 KEDOAH_25170 pdeG putative cyclic di-GMP phosphodiesterase PdeG 0.23 KEDOAH_19570 panE 2-dehydropantoate 2-reductase — —
Escherichia coli BL21 0.26 ECD_01143 putative membrane-anchored cyclic-di-GMP phosphodiesterase 0.23 ECD_00373 2-dehydropantoate reductase, NADPH-specific — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_02523 putative cyclic di-GMP phosphodiesterase PdeG 0.23 OHPLBJKB_03251 2-dehydropantoate 2-reductase low > 73
Escherichia coli ECOR27 0.25 NOLOHH_20845 pdeG putative cyclic di-GMP phosphodiesterase PdeG 0.23 NOLOHH_01345 panE 2-dehydropantoate 2-reductase low > 75
Escherichia coli ECRC62 0.25 BNILDI_19005 pdeG putative cyclic di-GMP phosphodiesterase PdeG 0.23 BNILDI_22760 panE 2-dehydropantoate 2-reductase low > 75
Escherichia coli BW25113 0.25 b1168 b1168 putative proteases (VIMSS) 0.23 b0425 panE 2-dehydropantoate 2-reductase (NCBI) low > 76
Escherichia coli ECOR38 0.25 HEPCGN_24630 pdeG putative cyclic di-GMP phosphodiesterase PdeG 0.23 HEPCGN_07025 panE 2-dehydropantoate 2-reductase low > 87
Escherichia coli ECRC98 0.23 JDDGAC_01120 pdeD putative cyclic di-GMP phosphodiesterase PdeD 0.23 JDDGAC_12050 panE 2-dehydropantoate 2-reductase low > 86
Escherichia coli ECRC102 0.23 NIAGMN_01520 pdeD putative cyclic di-GMP phosphodiesterase PdeD 0.23 NIAGMN_06450 panE 2-dehydropantoate 2-reductase — —
Escherichia coli Nissle 1917 0.23 ECOLIN_RS10095 cyclic diguanylate phosphodiesterase 0.23 ECOLIN_RS02560 2-dehydropantoate 2-reductase low > 55
Escherichia coli ECRC100 0.23 OKFHMN_26545 pdeD putative cyclic di-GMP phosphodiesterase PdeD 0.23 OKFHMN_08395 panE 2-dehydropantoate 2-reductase low > 80
Escherichia coli ECRC101 0.23 MCAODC_18865 pdeD putative cyclic di-GMP phosphodiesterase PdeD 0.23 MCAODC_27620 panE 2-dehydropantoate 2-reductase low > 87
Escherichia fergusonii Becca 0.23 EFB2_02185 putative cyclic di-GMP phosphodiesterase PdeD 0.23 EFB2_03632 2-dehydropantoate 2-reductase low > 86
Erwinia tracheiphila SCR3 0.23 LU632_RS13190 cyclic diguanylate phosphodiesterase 0.21 LU632_RS18455 panE 2-dehydropantoate 2-reductase low > 74
Pantoea sp. MT58 0.22 IAI47_08780 EAL domain-containing protein 0.21 IAI47_14715 2-dehydropantoate 2-reductase low > 76
Serratia liquefaciens MT49 0.22 IAI46_17310 cyclic di-GMP phosphodiesterase 0.22 IAI46_04950 2-dehydropantoate 2-reductase low > 86
Pectobacterium carotovorum WPP14 0.21 HER17_RS21350 EAL domain-containing protein 0.21 HER17_RS15910 2-dehydropantoate 2-reductase low > 75
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS34735 diguanylate phosphodiesterase 0.14 RR42_RS32960 2-dehydropantoate 2-reductase low > 128
Shewanella oneidensis MR-1 0.20 SO3821 rtn protein (NCBI ptt file) 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.20 Ac3H11_3798 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.14 Ac3H11_2346 2-dehydropantoate 2-reductase (EC 1.1.1.169) low > 79
Shewanella sp. ANA-3 0.20 Shewana3_0777 EAL domain-containing protein (RefSeq) 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_06460 diguanylate phosphodiesterase 0.08 H281DRAFT_01683 ketopantoate reductase (EC 1.1.1.169) low > 103

Not shown: 1 genomes with orthologs for PFLU_RS14595 only; 20 genomes with orthologs for PFLU_RS24155 only