Conservation of cofitness between PFLU_RS21585 and PFLU_RS18415 in Pseudomonas fluorescens SBW25

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS21585 chemotaxis protein CheV 1.0 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.47 8
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS21585 chemotaxis protein CheV 1.00 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas simiae WCS417 0.99 PS417_19615 chemotaxis protein CheW 0.97 PS417_16375 2-hydroxyacid dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_19285 chemotaxis protein CheW 0.85 AO353_02740 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_229 Chemotaxis protein CheV (EC 2.7.3.-) 0.87 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) low > 87
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2415 Chemotaxis protein CheV (EC 2.7.3.-) 0.88 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) low > 103
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_2280 Chemotaxis protein CheV (EC 2.7.3.-) 0.83 PfGW456L13_2028 D-lactate dehydrogenase (EC 1.1.1.28) low > 87
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_02950 chemotaxis protein CheW 0.86 AO356_19040 hydroxyacid dehydrogenase low > 104
Pseudomonas sp. RS175 0.96 PFR28_01012 Chemotaxis protein CheV 0.86 PFR28_03228 D-lactate dehydrogenase low > 88
Pseudomonas putida KT2440 0.89 PP_2128 putative CheV-like chemotaxis protein 0.80 PP_1649 D-lactate dehydrogenase low > 96
Pseudomonas sp. S08-1 0.87 OH686_21885 Chemotaxis protein CheV 0.70 OH686_18940 D-lactate dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_1842 Chemotaxis signal transduction protein 0.72 Psest_4064 Lactate dehydrogenase and related dehydrogenases low > 67
Shewanella amazonensis SB2B 0.60 Sama_2032 chemotaxis protein CheV (RefSeq) 0.55 Sama_0612 D-lactate dehydrogenase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.60 SO1989 cheV-1 chemotaxis protein CheV (NCBI ptt file) 0.57 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.60 Shewana3_2462 response regulator receiver modulated CheW protein (RefSeq) 0.58 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_2144 response regulator receiver modulated CheW protein (RefSeq) 0.55 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_10015 chemotaxis protein CheV 0.55 CSW01_14945 2-hydroxyacid dehydrogenase low > 62
Alteromonas macleodii MIT1002 0.57 MIT1002_02830 Chemotaxis protein CheV 0.51 MIT1002_01974 D-lactate dehydrogenase low > 70
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS38230 chemotaxis protein 0.62 QEN71_RS26130 2-hydroxyacid dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS07045 chemotaxis protein CheV 0.64 BPHYT_RS03835 D-lactate dehydrogenase low > 109
Enterobacter sp. TBS_079 0.30 MPMX20_03205 Chemotaxis protein CheV 0.52 MPMX20_02132 D-lactate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0335 Chemotaxis signal transduction protein 0.52 EX28DRAFT_1435 Lactate dehydrogenase and related dehydrogenases low > 76
Rahnella sp. WP5 0.30 EX31_RS11205 chemotaxis protein CheV 0.48 EX31_RS06470 2-hydroxyacid dehydrogenase low > 89
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09765 chemotaxis protein CheV 0.50 HSERO_RS12550 D-lactate dehydrogenase low > 78
Pectobacterium carotovorum WPP14 0.29 HER17_RS13880 chemotaxis protein 0.47 HER17_RS09630 2-hydroxyacid dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) 0.51 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) low > 78

Not shown: 5 genomes with orthologs for PFLU_RS21585 only; 38 genomes with orthologs for PFLU_RS18415 only