Conservation of cofitness between OKFHMN_22560 and OKFHMN_27230 in Escherichia coli ECRC100

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_22560 fadJ fatty acid oxidation complex subunit alpha FadJ 1.0 OKFHMN_27230 ydiJ Uncharacterized protein YdiJ 0.62 15
Escherichia coli ECRC101 1.00 MCAODC_13590 fadJ fatty acid oxidation complex subunit alpha FadJ 1.00 MCAODC_18180 ydiJ Uncharacterized protein YdiJ low > 87
Escherichia coli ECRC98 1.00 JDDGAC_26520 fadJ fatty acid oxidation complex subunit alpha FadJ 1.00 JDDGAC_01805 ydiJ Uncharacterized protein YdiJ low > 86
Escherichia coli ECRC99 1.00 KEDOAH_05635 fadJ fatty acid oxidation complex subunit alpha FadJ 1.00 KEDOAH_00880 ydiJ Uncharacterized protein YdiJ — —
Escherichia coli ECRC102 1.00 NIAGMN_20335 fadJ fatty acid oxidation complex subunit alpha FadJ 1.00 NIAGMN_00835 ydiJ Uncharacterized protein YdiJ — —
Escherichia coli ECOR27 0.99 NOLOHH_14195 fadJ fatty acid oxidation complex subunit alpha FadJ 0.99 NOLOHH_17750 ydiJ Uncharacterized protein YdiJ low > 75
Escherichia coli BL21 0.99 ECD_02265 enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase 1.00 ECD_01656 putative FAD-linked oxidoreductase low > 61
Escherichia coli ECRC62 0.99 BNILDI_13110 fadJ fatty acid oxidation complex subunit alpha FadJ 0.99 BNILDI_16540 ydiJ Uncharacterized protein YdiJ low > 75
Escherichia coli BW25113 0.99 b2341 yfcX fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) 1.00 b1687 ydiJ predicted FAD-linked oxidoreductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01365 Fatty acid oxidation complex subunit alpha 1.00 OHPLBJKB_02037 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.96 ECOLIN_RS13550 fatty acid oxidation complex subunit alpha FadJ 0.99 ECOLIN_RS09430 FAD-binding and (Fe-S)-binding domain-containing protein low > 55
Escherichia coli ECOR38 0.96 HEPCGN_21755 fadJ fatty acid oxidation complex subunit alpha FadJ 0.99 HEPCGN_05615 ydiJ Uncharacterized protein YdiJ low > 87
Escherichia fergusonii Becca 0.96 EFB2_01518 Fatty acid oxidation complex subunit alpha 1.00 EFB2_02305 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF1954 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.90 GFF3554 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0271 fatty oxidation complex, alpha subunit FadJ 0.91 EX28DRAFT_1696 FAD/FMN-containing dehydrogenases low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03268 Fatty acid oxidation complex subunit alpha 0.92 MPMX20_01926 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS20455 multifunctional fatty acid oxidation complex subunit alpha 0.89 BWI76_RS17050 FAD-binding oxidoreductase low > 92
Rahnella sp. WP5 0.65 EX31_RS19705 fatty acid oxidation complex subunit alpha FadJ 0.81 EX31_RS13925 FAD-binding oxidoreductase low > 89
Serratia liquefaciens MT49 0.64 IAI46_18045 fatty acid oxidation complex subunit alpha FadJ 0.82 IAI46_11130 FAD-binding oxidoreductase low > 86
Pantoea sp. MT58 0.64 IAI47_06130 fatty acid oxidation complex subunit alpha FadJ 0.82 IAI47_10890 FAD-binding oxidoreductase low > 76
Pectobacterium carotovorum WPP14 0.60 HER17_RS06890 fatty acid oxidation complex subunit alpha FadJ 0.82 HER17_RS08905 FAD-binding oxidoreductase low > 75
Shewanella oneidensis MR-1 0.55 SO3088 fatty oxidation complex, alpha subunit (NCBI ptt file) 0.58 SO2643 oxidoreductase, FAD-binding, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1461 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) 0.58 Shewana3_1737 FAD linked oxidase domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.55 Shew_2425 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) 0.57 Shew_1550 FAD linked oxidase domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_2167 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) 0.58 Sama_2071 oxidoreductase, FAD-binding, putative (RefSeq) low > 62
Dickeya dianthicola ME23 0.55 DZA65_RS15485 fatty acid oxidation complex subunit alpha FadJ 0.80 DZA65_RS13325 FAD-binding oxidoreductase low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS14550 fatty acid oxidation complex subunit alpha FadJ 0.80 HGI48_RS12860 FAD-binding oxidoreductase low > 71
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_05330 fatty acid oxidation complex subunit alpha FadJ 0.63 CSW01_06060 FAD-binding oxidoreductase low > 62
Dickeya dadantii 3937 0.54 DDA3937_RS14600 fatty acid oxidation complex subunit alpha FadJ 0.81 DDA3937_RS12795 FAD-binding oxidoreductase low > 74
Dinoroseobacter shibae DFL-12 0.29 Dshi_0835 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) 0.15 Dshi_3324 FAD linked oxidase domain protein (RefSeq) low > 64
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS35270 3-hydroxyacyl-CoA dehydrogenase 0.17 RR42_RS30390 lactate dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_00361 (3S)-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) / enoyl-CoA hydratase domain (from data) 0.17 H281DRAFT_03563 FAD/FMN-containing dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS13545 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) (from data) 0.17 BPHYT_RS34425 lactate dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.24 ABIE53_002151 3-hydroxyacyl-CoA dehydrogenase 0.16 ABIE53_004693 FAD/FMN-containing dehydrogenase/Fe-S oxidoreductase low > 113
Variovorax sp. SCN45 0.23 GFF4568 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.16 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 low > 127
Variovorax sp. OAS795 0.23 ABID97_RS06010 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein 0.16 ABID97_RS15850 FAD-linked oxidase C-terminal domain-containing protein low > 91

Not shown: 25 genomes with orthologs for OKFHMN_22560 only; 13 genomes with orthologs for OKFHMN_27230 only