Conservation of cofitness between OKFHMN_07410 and OKFHMN_24165 in Escherichia coli ECRC100

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_07410 tatE deaminated glutathione amidase 1.0 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.72 7
Escherichia coli BL21 1.00 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 1.00 ECD_01986 putative peptidase low > 61
Escherichia coli ECRC98 1.00 JDDGAC_11055 tatE deaminated glutathione amidase 1.00 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 86
Escherichia coli ECOR27 1.00 NOLOHH_23785 tatE deaminated glutathione amidase 1.00 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECRC99 1.00 KEDOAH_20560 tatE deaminated glutathione amidase 1.00 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia coli ECRC101 1.00 MCAODC_26625 tatE deaminated glutathione amidase 1.00 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli ECRC102 1.00 NIAGMN_05465 tatE deaminated glutathione amidase 1.00 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia coli ECOR38 0.99 HEPCGN_00865 tatE deaminated glutathione amidase 1.00 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03080 Deaminated glutathione amidase 1.00 OHPLBJKB_01623 putative protease YdcP low > 73
Escherichia coli ECRC62 0.99 BNILDI_21795 tatE deaminated glutathione amidase 1.00 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03410 deaminated glutathione amidase 1.00 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia fergusonii Becca 0.99 EFB2_03466 Deaminated glutathione amidase 1.00 EFB2_01770 23S rRNA 5-hydroxycytidine synthase low > 86
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2337 Predicted amidohydrolase 0.92 EX28DRAFT_0478 Collagenase and related proteases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.95 GFF3846 Putative protease low > 78
Enterobacter sp. TBS_079 0.72 MPMX20_01285 Deaminated glutathione amidase 0.91 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase low > 85
Klebsiella michiganensis M5al 0.71 BWI76_RS07990 carbon-nitrogen hydrolase 0.95 BWI76_RS19280 U32 family peptidase — —
Pantoea sp. MT58 0.61 IAI47_14065 deaminated glutathione amidase 0.83 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS19475 deaminated glutathione amidase 0.83 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ low > 71
Erwinia tracheiphila SCR3 0.58 LU632_RS16420 deaminated glutathione amidase 0.80 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 74
Rahnella sp. WP5 0.56 EX31_RS23065 deaminated glutathione amidase 0.85 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ low > 89
Dickeya dianthicola ME23 0.52 DZA65_RS06520 deaminated glutathione amidase 0.83 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS06130 deaminated glutathione amidase 0.85 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ low > 74
Pectobacterium carotovorum WPP14 0.51 HER17_RS17575 deaminated glutathione amidase 0.85 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Shewanella amazonensis SB2B 0.22 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.73 Sama_1004 U32 family peptidase (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.73 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.73 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ low > 109
Shewanella oneidensis MR-1 0.21 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.75 SO1252 peptidase, U32 family (NCBI ptt file) low > 76
Pseudomonas simiae WCS417 0.21 PS417_04280 carbon-nitrogen hydrolase 0.74 PS417_10300 protease low > 88
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.56 Ac3H11_3295 Probable protease (EC 3.4.24.3) low > 79
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.73 Pf6N2E2_45 Putative protease low > 103
Pseudomonas sp. S08-1 0.20 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.73 OH686_13055 Uncharacterized protease YegQ low > 80
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_05220 carbon-nitrogen hydrolase 0.74 AO353_19800 protease low > 101
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.74 PfGW456L13_2485 Putative protease low > 87
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_07100 carbon-nitrogen hydrolase 0.72 AO356_21300 protease low > 104
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.74 Pf1N1B4_3925 Putative protease low > 87
Pseudomonas sp. RS175 0.20 PFR28_00160 Deaminated glutathione amidase 0.73 PFR28_02843 hypothetical protein low > 88
Shewanella loihica PV-4 0.20 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.74 Shew_2783 peptidase U32 (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.19 Psest_3321 Predicted amidohydrolase 0.81 Psest_4096 Collagenase and related proteases low > 67
Alteromonas macleodii MIT1002 0.18 MIT1002_00226 (R)-stereoselective amidase 0.72 MIT1002_02342 putative protease YhbU precursor low > 70
Acinetobacter radioresistens SK82 0.16 MPMX26_00580 Deaminated glutathione amidase 0.64 MPMX26_02040 23S rRNA 5-hydroxycytidine synthase — —
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_1813 N-carbamoylputrescine amidase 0.63 B158DRAFT_1722 Collagenase and related proteases low > 40

Not shown: 26 genomes with orthologs for OKFHMN_07410 only; 8 genomes with orthologs for OKFHMN_24165 only