Conservation of cofitness between OKFHMN_22995 and OKFHMN_07355 in Escherichia coli ECRC100

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.0 OKFHMN_07355 rsfS ribosome silencing factor 0.75 6
Escherichia coli ECRC99 1.00 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 KEDOAH_20615 rsfS ribosome silencing factor — —
Escherichia coli ECRC98 1.00 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 JDDGAC_11000 rsfS ribosome silencing factor low > 87
Escherichia coli ECRC102 1.00 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NIAGMN_05410 rsfS ribosome silencing factor low > 80
Escherichia coli ECRC101 1.00 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 MCAODC_26570 rsfS ribosome silencing factor low > 88
Escherichia coli ECOR27 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NOLOHH_23730 rsfS ribosome silencing factor low > 76
Escherichia coli ECRC62 0.98 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 BNILDI_21740 rsfS ribosome silencing factor low > 75
Escherichia coli ECOR38 0.98 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 HEPCGN_00920 rsfS ribosome silencing factor low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 OHPLBJKB_03069 Ribosomal silencing factor RsfS low > 74
Escherichia coli BL21 0.95 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 1.00 ECD_00606 ribosomal silencing factor low > 61
Escherichia fergusonii Becca 0.94 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 EFB2_03455 Ribosomal silencing factor RsfS low > 86
Escherichia coli BW25113 0.94 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 1.00 b0637 ybeB orf, hypothetical protein (VIMSS) — —
Escherichia coli Nissle 1917 0.93 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 ECOLIN_RS03470 ribosome silencing factor — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.99 GFF4550 Iojap protein low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.94 MPMX20_01296 Ribosomal silencing factor RsfS low > 85
Klebsiella pneumoniae MKP103 0.79 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.95 KDGMDA_16405 ribosome silencing factor low > 95
Klebsiella michiganensis M5al 0.78 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.95 BWI76_RS08045 ribosome silencing factor RsfS — —
Erwinia tracheiphila HP pepo 2.2 0.78 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.83 IJEDHG_02455 rsfS ribosome silencing factor low > 61
Erwinia tracheiphila SCR3 0.77 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.83 LU632_RS16365 rsfS ribosome silencing factor low > 74
Dickeya dadantii 3937 0.77 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.92 DDA3937_RS06180 ribosome silencing factor low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.90 DZA65_RS06570 ribosome silencing factor low > 75
Erwinia amylovora T8 0.77 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.84 OLJFJH_17215 ribosome silencing factor low > 58
Dickeya dianthicola 67-19 0.76 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.91 HGI48_RS06225 ribosome silencing factor low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.88 HER17_RS15235 ribosome silencing factor low > 75
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.88 IAI47_14015 ribosome silencing factor low > 76
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.87 PagCFBP13505_RS03290 ribosome silencing factor low > 74
Serratia liquefaciens MT49 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.86 IAI46_05940 ribosome silencing factor — —
Rahnella sp. WP5 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.83 EX31_RS23130 ribosome silencing factor low > 89
Pseudomonas aeruginosa PA14 0.62 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.53 IKLFDK_20655 ribosome silencing factor low > 100
Azospirillum brasilense Sp245 0.30 AZOBR_RS33710 putative aminotransferase 0.43 AZOBR_RS04065 ribosome-associated protein IOJAP low > 97
Magnetospirillum magneticum AMB-1 0.29 AMB_RS00560 DegT/DnrJ/EryC1/StrS family aminotransferase 0.42 AMB_RS23800 ribosome silencing factor — —
Pseudomonas stutzeri RCH2 0.29 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.51 Psest_0510 iojap-like ribosome-associated protein — —
Marinobacter adhaerens HP15 0.28 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.54 HP15_603 Iojap-related protein — —
Shewanella sp. ANA-3 0.27 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.64 Shewana3_0997 iojap-like protein (RefSeq) — —
Dechlorosoma suillum PS 0.27 Dsui_0082 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.45 Dsui_0452 iojap-like ribosome-associated protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_07955 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.30 CA264_20060 ribosome silencing factor RsfS low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.65 MIT1002_01853 Ribosomal silencing factor RsfS low > 70
Shewanella loihica PV-4 0.25 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.60 Shew_2933 iojap-like protein (RefSeq) — —
Methylophilus sp. DMC18 0.25 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 0.43 GFF826 Ribosomal silencing factor RsfS low > 43
Shewanella oneidensis MR-1 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) 0.64 SO1170 iojap domain protein (NCBI ptt file) low > 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.31 ABZR88_RS20165 ribosome silencing factor low > 71
Rhodopseudomonas palustris CGA009 0.21 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.45 TX73_000865 ribosome silencing factor — —

Not shown: 41 genomes with orthologs for OKFHMN_22995 only; 14 genomes with orthologs for OKFHMN_07355 only