Conservation of cofitness between NOLOHH_06485 and NOLOHH_17720 in Escherichia coli ECOR27

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06485 rhtC threonine export protein RhtC 1.0 NOLOHH_17720 ydiB quinate/shikimate dehydrogenase 0.53 18
Escherichia coli ECRC101 1.00 MCAODC_04860 rhtC threonine export protein RhtC 0.99 MCAODC_18210 ydiB quinate/shikimate dehydrogenase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_12110 rhtC threonine export protein RhtC 0.99 NIAGMN_00865 ydiB quinate/shikimate dehydrogenase — —
Escherichia coli ECRC100 1.00 OKFHMN_14355 rhtC threonine export protein RhtC 0.99 OKFHMN_27200 ydiB quinate/shikimate dehydrogenase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_13795 rhtC threonine export protein RhtC 0.99 KEDOAH_00910 ydiB quinate/shikimate dehydrogenase — —
Escherichia coli ECRC98 1.00 JDDGAC_17980 rhtC threonine export protein RhtC 0.99 JDDGAC_01775 ydiB quinate/shikimate dehydrogenase low > 86
Escherichia coli BW25113 1.00 b3823 rhtC threonine efflux system (NCBI) 1.00 b1692 ydiB quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04228 Threonine efflux protein 1.00 OHPLBJKB_02032 Quinate/shikimate dehydrogenase low > 73
Escherichia coli BL21 1.00 ECD_03702 threonine efflux pump 1.00 ECD_01661 quinate/shikimate 5-dehydrogenase, NAD(P)-binding — —
Escherichia coli ECOR38 1.00 HEPCGN_13055 rhtC threonine export protein RhtC 0.99 HEPCGN_05585 ydiB quinate/shikimate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21940 threonine export protein RhtC 1.00 ECOLIN_RS09455 quinate/shikimate dehydrogenase low > 55
Escherichia fergusonii Becca 0.99 EFB2_04814 Threonine efflux protein 1.00 EFB2_02300 Quinate/shikimate dehydrogenase low > 86
Escherichia coli ECRC62 0.99 BNILDI_05045 rhtC threonine export protein RhtC 1.00 BNILDI_16510 ydiB quinate/shikimate dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF249 L-lysine permease 0.88 GFF3549 Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) low > 78
Klebsiella michiganensis M5al 0.88 BWI76_RS01250 threonine export protein RhtC 0.53 BWI76_RS04655 shikimate dehydrogenase low > 92
Rahnella sp. WP5 0.74 EX31_RS15215 threonine export protein RhtC 0.16 EX31_RS03145 shikimate 5-dehydrogenase low > 89
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11510 homoserine/threonine efflux transporter 0.18 ABZR86_RS16880 shikimate 5-dehydrogenase low > 74
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.17 Psyr_2418 shikimate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.17 Psyr_2418 shikimate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS00520 LysE family transporter 0.18 QEN71_RS33300 shikimate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.27 ABIE53_004917 threonine/homoserine/homoserine lactone efflux protein 0.18 ABIE53_004075 shikimate dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS33475 threonine transporter 0.18 BPHYT_RS22685 shikimate 5-dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_06930 lysine transporter LysE 0.18 AO356_27475 shikimate dehydrogenase low > 104
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_1618 L-lysine permease 0.18 PfGW456L13_1427 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3245 L-lysine permease 0.18 Pf6N2E2_5061 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) low > 103
Pseudomonas simiae WCS417 0.26 PS417_04535 lysine transporter LysE 0.17 PS417_24435 shikimate dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS04580 lysine transporter LysE 0.17 PFLU_RS26360 shikimate dehydrogenase low > 109
Pseudomonas sp. RS175 0.26 PFR28_03621 Threonine efflux protein 0.17 PFR28_03811 Quinate/shikimate dehydrogenase (NAD(+)) low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS04580 lysine transporter LysE 0.17 PFLU_RS26360 shikimate dehydrogenase low > 109
Rhizobium sp. OAE497 0.26 ABIE40_RS00900 LysE family translocator 0.20 ABIE40_RS19250 shikimate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_15005 lysine transporter LysE 0.17 AO353_06175 shikimate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2955 L-lysine permease 0.16 Pf1N1B4_3930 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) low > 87
Variovorax sp. SCN45 0.22 GFF6288 L-lysine permease 0.17 GFF2599 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 127
Rhodospirillum rubrum S1H 0.22 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.20 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) — —
Agrobacterium fabrum C58 0.21 Atu2633 RhtB family transporter 0.24 Atu4295 shikimate 5-dehydrogenase low > 89
Azospirillum brasilense Sp245 0.19 AZOBR_RS14545 threonine transporter 0.21 AZOBR_RS01765 shikimate 5-dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_2771 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.20 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) — —

Not shown: 26 genomes with orthologs for NOLOHH_06485 only; 19 genomes with orthologs for NOLOHH_17720 only