| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Azospirillum sp. SherDot2 | 1.0 | MPMX19_04439 | | Pca regulon regulatory protein | 1.0 | MPMX19_04052 | | putative sugar-binding periplasmic protein | 0.51 | 6 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS20005 | | IclR family transcriptional regulator | 0.27 | HSERO_RS22730 | | sugar ABC transporter substrate-binding protein | low | > 78 |
| Pseudomonas lactucae CFBP13502 | 0.50 | GEMAOFIL_01498 | | Pca regulon regulatory protein | 0.42 | GEMAOFIL_04565 | | putative sugar-binding periplasmic protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_4014 | | regulatory protein, IclR | 0.43 | Psyr_1113 | | glucose-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_4014 | | regulatory protein, IclR | 0.43 | Psyr_1113 | | glucose-binding protein | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS06715 | | IclR family transcriptional regulator | 0.41 | PFLU_RS23760 | | carbohydrate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.50 | QF045_RS09465 | | pca regulon transcriptional regulator PcaR | 0.41 | QF045_RS24280 | | ABC transporter substrate-binding protein | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS06715 | | IclR family transcriptional regulator | 0.41 | PFLU_RS23760 | | carbohydrate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_06690 | | IclR family transcriptional regulator | 0.42 | PS417_22145 | | glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) | low | > 88 |
| Pseudomonas segetis P6 | 0.49 | MPMX49_02735 | | Pca regulon regulatory protein | 0.45 | MPMX49_02837 | | putative sugar-binding periplasmic protein | low | > 75 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_04950 | | IclR family transcriptional regulator | 0.45 | AO356_05195 | | sugar ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_2839 | | Pca regulon regulatory protein PcaR | 0.44 | Pf6N2E2_2892 | | Glucose ABC transport system, periplasmic sugar-binding protein | low | > 103 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_00618 | | Pca regulon regulatory protein | 0.44 | PFR28_00566 | | putative sugar-binding periplasmic protein | low | > 88 |
| Pseudomonas sp. DMC3 | 0.49 | GFF2199 | | Pca regulon regulatory protein | 0.42 | GFF5147 | | putative sugar-binding periplasmic protein | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_4594 | | Pca regulon regulatory protein PcaR | 0.44 | PfGW456L13_1894 | | ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component (from data) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_3230 | | Pca regulon regulatory protein PcaR | 0.44 | Pf1N1B4_596 | | Glucose ABC transport system, periplasmic sugar-binding protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_17185 | | IclR family transcriptional regulator | 0.43 | AO353_03395 | | sugar ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas sp. SVBP6 | 0.48 | COO64_RS12260 | pcaR | pca regulon transcriptional regulator PcaR | 0.46 | COO64_RS04555 | | ABC transporter substrate-binding protein | low | > 93 |
| Pseudomonas sp. BP01 | 0.48 | JOY50_RS14390 | pcaR | pca regulon transcriptional regulator PcaR | 0.41 | JOY50_RS11415 | | ABC transporter substrate-binding protein | low | > 84 |
| Pseudomonas aeruginosa PUPa3 | 0.48 | DQ20_RS31595 | | IclR family transcriptional regulator C-terminal domain-containing protein | 0.44 | DQ20_RS40070 | | ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.48 | DY961_RS27060 | | IclR family transcriptional regulator C-terminal domain-containing protein | 0.44 | DY961_RS00975 | | ABC transporter substrate-binding protein | low | > 100 |
| Pseudomonas putida KT2440 | 0.48 | PP_1375 | | transcription regulatory protein (pca regulon) | 0.42 | PP_1015 | | mannose/glucose ABC transporter, glucose-binding periplasmic protein | low | > 96 |
| Pseudomonas aeruginosa PA14 | 0.48 | IKLFDK_24765 | | IclR family transcriptional regulator | 0.44 | IKLFDK_16210 | | sugar ABC transporter substrate-binding protein | low | > 98 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_3073 | | beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family | 0.46 | Psest_1896 | | ABC-type sugar transport system, periplasmic component | low | > 67 |
| Sinorhizobium meliloti 1021 | 0.46 | SM_b20586 | | IclR family transcriptional regulator | 0.45 | SMc04396 | | periplasmic binding protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_005169 | | IclR family pca regulon transcriptional regulator | 0.44 | ABIE53_001277 | | glucose/mannose transport system substrate-binding protein | 0.21 | 69 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS14175 | | IclR family transcriptional regulator | 0.44 | QEN71_RS03335 | | ABC transporter substrate-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_01512 | | transcriptional regulator, IclR family | 0.43 | H281DRAFT_00166 | | carbohydrate ABC transporter substrate-binding protein, CUT1 family | low | > 103 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS19565 | | IclR family transcriptional regulator | 0.41 | ABIE40_RS17190 | | ABC transporter substrate-binding protein | low | > 107 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS29425 | | IclR family transcriptional regulator | 0.44 | BPHYT_RS00415 | | sugar ABC transporter substrate-binding protein | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_3923 | | Transcriptional regulator, IclR family | 0.47 | Ac3H11_2062 | | glucose ABC transporter, substrate-binding component (from data) | low | > 79 |
| Agrobacterium fabrum C58 | 0.41 | Atu4546 | | IclR family transcriptional regulator | 0.26 | Atu3352 | | sugar ABC transporter substrate-binding protein | low | > 89 |
Not shown: 30 genomes with orthologs for MPMX19_04439 only; 4 genomes with orthologs for MPMX19_04052 only