Conservation of cofitness between MIT1002_00905 and MIT1002_03983 in Alteromonas macleodii MIT1002

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Alteromonas macleodii MIT1002 1.0 MIT1002_00905 Histidine ammonia-lyase 1.0 MIT1002_03983 Putative general secretion pathway protein K 0.60 3
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_06080 histidine ammonia-lyase 0.24 CSW01_13755 type II secretion system protein K — —
Shewanella oneidensis MR-1 0.62 SO0098 hutH histidine ammonia-lyase (NCBI ptt file) 0.32 SO0173 gspK general secretion pathway protein K (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.62 Shewana3_0101 histidine ammonia-lyase (RefSeq) 0.32 Shewana3_0158 general secretion pathway protein K (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_3756 histidine ammonia-lyase (RefSeq) 0.34 Shew_3612 general secretion pathway protein K (RefSeq) low > 60
Acinetobacter baumannii LAC-4 0.61 RR41_RS00385 histidine ammonia-lyase 0.12 RR41_RS12100 type II secretion system minor pseudopilin GspK low > 55
Enterobacter sp. TBS_079 0.61 MPMX20_01400 Histidine ammonia-lyase 0.12 MPMX20_01522 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2219 histidine ammonia-lyase (EC 4.3.1.3) 0.12 EX28DRAFT_2072 Type II secretory pathway, component PulK low > 76
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_1432 histidine ammonia-lyase (EC 4.3.1.3) 0.17 B158DRAFT_0696 Type II secretory pathway, component PulK low > 40
Pseudomonas sp. S08-1 0.59 OH686_16755 histidine ammonia-lyase 0.16 OH686_11755 General secretion pathway protein K low > 80
Pseudomonas aeruginosa PA14 0.59 IKLFDK_28030 histidine ammonia-lyase 0.12 IKLFDK_15760 GspK family T2SS minor pseudopilin variant XcpX 0.18 89
Pseudomonas aeruginosa MRSN321 0.59 DY961_RS11315 hutH;go_function=histidine histidine ammonia-lyase 0.11 DY961_RS01440 xcpX;inference=COORDINATES GspK family T2SS minor pseudopilin variant XcpX low > 100
Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS50780 hutH;go_function=histidine histidine ammonia-lyase 0.12 DQ20_RS34115 xcpX;inference=COORDINATES GspK family T2SS minor pseudopilin variant XcpX low > 101
Klebsiella pneumoniae MKP103 0.59 KDGMDA_17005 histidine ammonia-lyase 0.24 KDGMDA_13310 type II secretion system minor pseudopilin GspK low > 95
Klebsiella michiganensis M5al 0.58 BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.19 BWI76_RS05055 type II secretion system protein K low > 92
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS23515 histidine ammonia-lyase 0.09 QEN71_RS29550 type II secretion system minor pseudopilin GspK 0.39 50
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04873 histidine ammonia-lyase 0.11 H281DRAFT_02348 general secretion pathway protein K low > 103
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS07555 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.11 BPHYT_RS19635 general secretion pathway protein K low > 109
Rahnella sp. WP5 0.52 EX31_RS06755 histidine ammonia-lyase 0.16 EX31_RS16200 type II secretion system minor pseudopilin GspK low > 89
Dickeya dadantii 3937 0.51 DDA3937_RS14995 histidine ammonia-lyase 0.24 DDA3937_RS14765 type II secretion system minor pseudopilin GspK low > 74
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS01025 histidine ammonia-lyase 0.08 ABZR87_RS03430 type II secretion system minor pseudopilin GspK low > 80
Dickeya dianthicola ME23 0.50 DZA65_RS15835 histidine ammonia-lyase 0.21 DZA65_RS15645 type II secretion system minor pseudopilin GspK low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS15090 histidine ammonia-lyase 0.21 HGI48_RS14700 type II secretion system minor pseudopilin GspK low > 71
Erwinia amylovora T8 0.50 OLJFJH_16540 histidine ammonia-lyase 0.11 OLJFJH_01145 type II secretion system minor pseudopilin GspK low > 58
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3296.1 Histidine ammonia-lyase (EC 4.3.1.3) 0.23 Xcc-8004.949.1 General secretion pathway protein K low > 74
Caulobacter crescentus NA1000 0.45 CCNA_01010 histidine ammonia-lyase 0.25 CCNA_00179 type II secretion pathway protein K low > 66
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01010 histidine ammonia-lyase 0.25 CCNA_00179 type II secretion pathway protein K low > 67
Sphingobium sp. HT1-2 0.45 GFF1212 Histidine ammonia-lyase (EC 4.3.1.3) 0.16 GFF3512 General secretion pathway protein K low > 95
Shewanella amazonensis SB2B 0.35 Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.29 Sama_0176 general secretion pathway protein K (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.20 Psest_3695 Histidine ammonia-lyase 0.14 Psest_4196 Type II secretory pathway, component PulK low > 67
Escherichia coli ECOR38 0.18 HEPCGN_01360 histidine ammonia-lyase 0.18 HEPCGN_18085 gspK general secretion pathway protein K low > 88

Not shown: 61 genomes with orthologs for MIT1002_00905 only; 12 genomes with orthologs for MIT1002_03983 only