Conservation of cofitness between IAI47_17795 and IAI47_13090 in Pantoea sp. MT58

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_17795 DMT family transporter 1.0 IAI47_13090 serine hydrolase 0.24 3
Serratia liquefaciens MT49 0.70 IAI46_13035 DMT family transporter 0.75 IAI46_08285 serine hydrolase low > 86
Pectobacterium carotovorum WPP14 0.68 HER17_RS14160 DMT family transporter 0.77 HER17_RS12545 serine hydrolase low > 75
Escherichia coli ECOR38 0.62 HEPCGN_10255 ytfF Inner membrane protein YtfF 0.75 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 85
Escherichia coli ECRC101 0.62 OKFHMN_12060 ytfF Inner membrane protein YtfF 0.75 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC102 0.62 NIAGMN_09910 ytfF Inner membrane protein YtfF 0.75 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC98 0.62 JDDGAC_15700 ytfF Inner membrane protein YtfF 0.75 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC101 0.62 MCAODC_02575 ytfF Inner membrane protein YtfF 0.75 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli Nissle 1917 0.62 ECOLIN_RS24460 DMT family transporter 0.75 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC99 0.62 KEDOAH_16095 ytfF Inner membrane protein YtfF 0.75 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Enterobacter sp. TBS_079 0.62 MPMX20_00487 Inner membrane protein YtfF 0.72 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC low > 85
Escherichia coli BL21 0.62 ECD_04082 DMT transporter family inner membrane protein 0.74 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a low > 60
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3394 Permeases of the drug/metabolite transporter (DMT) superfamily 0.73 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Escherichia coli BW25113 0.61 b4210 ytfF predicted inner membrane protein (RefSeq) 0.74 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) low > 76
Escherichia fergusonii Becca 0.61 EFB2_04318 Inner membrane protein YtfF 0.75 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF863 Putative membrane protein 0.70 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03823 Inner membrane protein YtfF 0.74 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC low > 73
Escherichia coli ECRC62 0.61 BNILDI_07200 ytfF Inner membrane protein YtfF 0.75 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECOR27 0.61 NOLOHH_04320 ytfF Inner membrane protein YtfF 0.75 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 57
Pseudomonas sp. S08-1 0.61 OH686_10685 Inner membrane protein YtfF 0.42 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Klebsiella michiganensis M5al 0.60 BWI76_RS02710 EamA family transporter 0.72 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase low > 92
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS22180 DMT family transporter 0.39 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein — —
Lysobacter sp. OAE881 0.58 ABIE51_RS00565 DMT family transporter 0.41 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein low > 62
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS06535 DMT family transporter 0.35 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein low > 153
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS11960 DMT family transporter 0.36 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12025 multidrug DMT transporter permease 0.34 BPHYT_RS02415 cytochrome C550 low > 109
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_00633 Permease of the drug/metabolite transporter (DMT) superfamily 0.34 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 low > 103
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4238.1 putative membrane protein 0.39 Xcc-8004.907.1 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 74
Ralstonia solanacearum GMI1000 0.22 RS_RS01145 EamA/RhaT family transporter 0.35 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Ralstonia solanacearum PSI07 0.22 RPSI07_RS16980 EamA/RhaT family transporter 0.35 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS11755 multidrug DMT transporter permease 0.32 RR42_RS01680 cytochrome C550 low > 128
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS10345 EamA/RhaT family transporter 0.34 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS03235 EamA/RhaT family transporter 0.34 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_0911 Protein of unknown function DUF6 0.40 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_0911 Protein of unknown function DUF6 0.40 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Dickeya dadantii 3937 0.21 DDA3937_RS08695 DMT family transporter 0.73 DDA3937_RS09420 serine hydrolase low > 74
Variovorax sp. SCN45 0.18 GFF6462 Integral membrane protein 0.35 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 127
Rhizobium sp. OAE497 0.14 ABIE40_RS01500 DMT family transporter 0.20 ABIE40_RS09505 D-alanyl-D-alanine carboxypeptidase family protein low > 107
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS16760 DMT family transporter 0.42 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens SBW25 0.12 PFLU_RS16760 DMT family transporter 0.42 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109

Not shown: 7 genomes with orthologs for IAI47_17795 only; 23 genomes with orthologs for IAI47_13090 only