Conservation of cofitness between HSERO_RS07610 and HSERO_RS22955 in Herbaspirillum seropedicae SmR1

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07610 fumarate hydratase 1.0 HSERO_RS22955 D-amino acid dehydrogenase 0.38 13
Ralstonia solanacearum GMI1000 0.73 RS_RS23320 class II fumarate hydratase 0.29 RS_RS02525 FAD-dependent oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.73 RPSI07_RS05900 class II fumarate hydratase 0.29 RPSI07_RS21515 FAD-dependent oxidoreductase low > 81
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS18630 class II fumarate hydratase 0.28 ABZR87_RS07655 FAD-dependent oxidoreductase low > 80
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS17680 class II fumarate hydratase 0.29 RALBFv3_RS11700 FAD-dependent oxidoreductase — —
Ralstonia solanacearum UW163 0.73 UW163_RS21470 class II fumarate hydratase 0.29 UW163_RS01885 FAD-dependent oxidoreductase — —
Paraburkholderia graminis OAS925 0.72 ABIE53_003084 fumarate hydratase class II 0.18 ABIE53_004136 D-amino-acid dehydrogenase low > 113
Variovorax sp. SCN45 0.72 GFF479 Fumarate hydratase class II (EC 4.2.1.2) 0.56 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04314 fumarase, class II 0.23 H281DRAFT_06095 D-amino-acid dehydrogenase low > 103
Variovorax sp. OAS795 0.71 ABID97_RS17545 class II fumarate hydratase 0.53 ABID97_RS21150 FAD-dependent oxidoreductase low > 91
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14615 fumarate hydratase 0.27 BPHYT_RS26530 amino acid dehydrogenase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) 0.32 GFF4939 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 90
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS04360 class II fumarate hydratase 0.23 QEN71_RS31650 FAD-dependent oxidoreductase low > 153
Rhodopseudomonas palustris CGA009 0.59 TX73_018130 class II fumarate hydratase 0.17 TX73_019540 FAD-dependent oxidoreductase low > 86
Sinorhizobium meliloti 1021 0.58 SMc00149 fumarate hydratase 0.30 SMc03265 amino acid dehydrogenase transmembrane protein — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS03655 class II fumarate hydratase 0.24 ABCV34_RS10190 FAD-dependent oxidoreductase low > 48
Pseudomonas simiae WCS417 0.57 PS417_19200 fumarate hydratase 0.18 PS417_14320 FAD-dependent oxidoreductase low > 88
Phaeobacter inhibens DSM 17395 0.57 PGA1_c13520 fumarate hydratase class II 0.23 PGA1_c05140 D-amino acid dehydrogenase small subunit — —
Rhizobium sp. OAE497 0.56 ABIE40_RS10540 class II fumarate hydratase 0.23 ABIE40_RS02050 FAD-dependent oxidoreductase low > 107
Rhodospirillum rubrum S1H 0.56 Rru_A2129 Fumarate hydratase, class II (NCBI) 0.25 Rru_A2064 FAD dependent oxidoreductase (NCBI) low > 58
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) 0.20 PfGW456L13_3586 D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster low > 87
Agrobacterium fabrum C58 0.56 Atu1616 fumarate hydratase 0.25 Atu3364 D-amino acid dehydrogenase — —
Pseudomonas putida KT2440 0.56 PP_1755 fumarate hydratase (class 2) 0.20 PP_1255 putative cis-4-hydroxy-D-proline oxidase low > 96
Pseudomonas fluorescens SBW25 0.55 PFLU_RS21170 class II fumarate hydratase 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS21170 class II fumarate hydratase 0.20 PFLU_RS16215 FAD-binding oxidoreductase low > 109
Bosea sp. OAE506 0.53 ABIE41_RS12805 class II fumarate hydratase 0.28 ABIE41_RS13645 FAD-binding oxidoreductase — —
Shewanella amazonensis SB2B 0.40 Sama_0822 fumarate hydratase (RefSeq) 0.24 Sama_1533 D-amino-acid dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.38 Shew_0068 fumarate lyase (RefSeq) 0.23 Shew_2360 D-hydroxyproline dehydrogenase (from data) low > 60

Not shown: 70 genomes with orthologs for HSERO_RS07610 only; 0 genomes with orthologs for HSERO_RS22955 only