Conservation of cofitness between HSERO_RS22465 and HSERO_RS22455 in Herbaspirillum seropedicae SmR1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22465 sugar ABC transporter 1.0 HSERO_RS22455 AraC family transcriptional regulator 0.95 1
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_28510 xylose transporter 0.65 AO356_28495 AraC family transcriptional regulator 0.57 1
Pseudomonas simiae WCS417 0.79 PS417_10935 xylose transporter 0.64 PS417_10950 AraC family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.78 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein 0.63 PFLU_RS11310 DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein 0.63 PFLU_RS11310 DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_1456 D-xylose transport ATP-binding protein XylG 0.64 Pf6N2E2_1453 Xylose activator XylR (AraC family) 0.20 68
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_2885 xylose ABC transporter ATP-binding protein 0.64 Psyr_2882 transcriptional regulator, AraC family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_2885 xylose ABC transporter ATP-binding protein 0.64 Psyr_2882 transcriptional regulator, AraC family low > 86
Pseudomonas sp. RS175 0.78 PFR28_02350 Xylose import ATP-binding protein XylG 0.64 PFR28_02347 Xylose operon regulatory protein 0.72 1
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_03878 xylose ABC transporter ATP-binding protein 0.66 H281DRAFT_03875 transcriptional regulator, AraC family low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_004931 D-xylose transport system ATP-binding protein 0.66 ABIE53_004928 LacI family transcriptional regulator low > 113
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS18225 D-xylose ABC transporter ATP-binding protein 0.65 ABZR87_RS18215 DNA-binding transcriptional regulator 0.53 6
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS32815 sugar ABC transporter 0.65 BPHYT_RS32830 AraC family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS25865 D-xylose ABC transporter ATP-binding protein 0.64 QEN71_RS25880 DNA-binding transcriptional regulator 0.90 4
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS14415 D-xylose ABC transporter ATP-binding protein 0.60 ABZR86_RS14435 DNA-binding transcriptional regulator low > 74
Escherichia coli ECRC98 0.53 JDDGAC_19575 xylG D-xylose ABC transporter ATP-binding protein 0.42 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR low > 86
Escherichia coli ECRC62 0.53 BNILDI_03655 xylG D-xylose ABC transporter ATP-binding protein 0.42 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00137 Xylose import ATP-binding protein XylG 0.42 OHPLBJKB_00135 Xylose operon regulatory protein low > 73
Escherichia coli ECRC99 0.53 KEDOAH_12205 xylG D-xylose ABC transporter ATP-binding protein 0.42 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR — —
Escherichia coli ECOR38 0.53 HEPCGN_14830 xylG D-xylose ABC transporter ATP-binding protein 0.42 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR low > 87
Escherichia coli ECRC101 0.53 MCAODC_06460 xylG D-xylose ABC transporter ATP-binding protein 0.42 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR low > 87
Escherichia coli ECRC100 0.53 OKFHMN_15945 xylG D-xylose ABC transporter ATP-binding protein 0.42 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR low > 80
Escherichia coli ECRC102 0.53 NIAGMN_13705 xylG D-xylose ABC transporter ATP-binding protein 0.42 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR — —
Escherichia coli BW25113 0.53 b3567 xylG fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.42 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 0.54 3
Escherichia coli ECOR27 0.53 NOLOHH_07890 xylG D-xylose ABC transporter ATP-binding protein 0.42 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS20400 D-xylose ABC transporter ATP-binding protein 0.42 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR low > 55
Escherichia fergusonii Becca 0.53 EFB2_00240 Xylose import ATP-binding protein XylG 0.42 EFB2_00238 Xylose operon regulatory protein low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3832 D-xylose ABC transporter, ATP-binding protein 0.43 EX28DRAFT_3834 Transcriptional regulators low > 76
Klebsiella michiganensis M5al 0.53 BWI76_RS27035 xylose ABC transporter ATP-binding protein 0.42 BWI76_RS27045 XylR family transcriptional regulator 0.23 2
Enterobacter sp. TBS_079 0.53 MPMX20_00163 Xylose import ATP-binding protein XylG 0.42 MPMX20_00161 Xylose operon regulatory protein 0.68 3
Pantoea sp. MT58 0.52 IAI47_00185 xylose ABC transporter ATP-binding protein 0.43 IAI47_00175 XylR family transcriptional regulator low > 76
Dickeya dianthicola ME23 0.52 DZA65_RS00320 xylose ABC transporter ATP-binding protein 0.43 DZA65_RS00330 DNA-binding transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS00320 xylose ABC transporter ATP-binding protein 0.43 HGI48_RS00330 XylR family transcriptional regulator low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS20925 xylose ABC transporter ATP-binding protein 0.43 DDA3937_RS20915 DNA-binding transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.51 HER17_RS21075 xylose ABC transporter ATP-binding protein 0.44 HER17_RS21065 XylR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.51 IAI46_00290 xylose ABC transporter ATP-binding protein 0.42 IAI46_00300 DNA-binding transcriptional regulator low > 86
Rahnella sp. WP5 0.47 EX31_RS09755 xylose ABC transporter ATP-binding protein 0.43 EX31_RS09745 XylR family transcriptional regulator low > 89

Not shown: 4 genomes with orthologs for HSERO_RS22465 only; 5 genomes with orthologs for HSERO_RS22455 only