Conservation of cofitness between HSERO_RS08590 and HSERO_RS22345 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08590 pseudouridine synthase 1.0 HSERO_RS22345 urea carboxylase 0.30 20
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS15880 pseudouridine synthase 0.47 RR42_RS26670 urea carboxylase low > 128
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS03150 16S rRNA pseudouridine(516) synthase 0.73 QEN71_RS15415 urea carboxylase low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_003276 16S rRNA pseudouridine516 synthase 0.73 ABIE53_006250 urea carboxylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) 0.72 H281DRAFT_03840 urea carboxylase low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS15560 pseudouridine synthase 0.55 BPHYT_RS25975 urea carboxylase low > 109
Acinetobacter radioresistens SK82 0.44 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A 0.53 MPMX26_00928 Carbamoyl-phosphate synthase large chain low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.56 GFF5718 Urea carboxylase (EC 6.3.4.6) low > 90
Caulobacter crescentus NA1000 0.27 CCNA_01915 ribosomal small subunit pseudouridine synthase A 0.53 CCNA_01905 urea carboxylase low > 66
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_01915 ribosomal small subunit pseudouridine synthase A 0.53 CCNA_01905 urea carboxylase low > 67
Pectobacterium carotovorum WPP14 0.26 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA 0.74 HER17_RS09210 urea carboxylase low > 75
Rahnella sp. WP5 0.26 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.51 EX31_RS05610 urea carboxylase low > 89
Dickeya dadantii 3937 0.26 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.57 DDA3937_RS21015 urea carboxylase low > 74
Pantoea sp. MT58 0.26 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA 0.74 IAI47_20190 urea carboxylase low > 76
Dickeya dianthicola ME23 0.26 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA 0.57 DZA65_RS00230 urea carboxylase low > 75
Dickeya dianthicola 67-19 0.25 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA 0.57 HGI48_RS00225 urea carboxylase low > 71
Serratia liquefaciens MT49 0.25 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.51 IAI46_07215 urea carboxylase low > 86
Enterobacter sp. TBS_079 0.25 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A 0.74 MPMX20_02079 D-alanine--D-alanine ligase low > 85
Klebsiella michiganensis M5al 0.24 BWI76_RS19810 16S rRNA pseudouridine(516) synthase 0.74 BWI76_RS13985 urea carboxylase — —
Marinobacter adhaerens HP15 0.24 HP15_3359 pseudouridine synthase, Rsu 0.60 HP15_3149 urea amidolyase related protein low > 73
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.77 Pf1N1B4_3301 Urea carboxylase (EC 6.3.4.6) low > 87
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_04690 16S rRNA pseudouridine(516) synthase 0.76 AO356_04670 urea carboxylase low > 104
Pseudomonas stutzeri RCH2 0.19 Psest_3049 pseudouridine synthase 0.78 Psest_2351 urea carboxylase low > 67
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.76 Pf6N2E2_2781 Urea carboxylase (EC 6.3.4.6) low > 103
Pseudomonas sp. RS175 0.19 PFR28_00665 Ribosomal small subunit pseudouridine synthase A 0.74 PFR28_00669 Carbamoyl-phosphate synthase large chain low > 88
Pseudomonas sp. S08-1 0.18 OH686_05950 SSU rRNA pseudouridine(516) synthase 0.78 OH686_05925 urea carboxylase low > 80

Not shown: 46 genomes with orthologs for HSERO_RS08590 only; 1 genomes with orthologs for HSERO_RS22345 only