Conservation of cofitness between HSERO_RS18645 and HSERO_RS08585 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18645 chemotaxis protein CheY 1.0 HSERO_RS08585 RNA methyltransferase 0.33 6
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS16850 HD domain-containing phosphohydrolase 0.47 ABZR87_RS10615 RNA methyltransferase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS05625 two-component system response regulator 0.48 RPSI07_RS18405 RNA methyltransferase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02781 Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains 0.48 H281DRAFT_00540 tRNA/rRNA methyltransferase low > 103
Paraburkholderia graminis OAS925 0.39 ABIE53_006006 adenylate cyclase 0.48 ABIE53_002713 tRNA/rRNA methyltransferase low > 113
Dechlorosoma suillum PS 0.36 Dsui_1886 response regulator containing a CheY-like receiver domain and an HD-GYP domain 0.39 Dsui_2367 RNA methyltransferase, TrmH family, group 1 low > 51
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3168 Response regulator 0.41 Ac3H11_3646 tRNA:Cm32/Um32 methyltransferase low > 79
Pseudomonas putida KT2440 0.32 PP_2942 Response regulator 0.38 PP_0839 tRNA Cm32/Um32 methyltransferase low > 96
Pseudomonas simiae WCS417 0.32 PS417_05440 chemotaxis protein CheY 0.38 PS417_23215 RNA methyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS05525 response regulator 0.39 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS05525 response regulator 0.39 PFLU_RS24870 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 109
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5467 Response regulator 0.39 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase low > 103
Pseudomonas sp. RS175 0.31 PFR28_03482 Sensor histidine kinase RcsC 0.38 PFR28_00283 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 low > 88
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_17715 chemotaxis protein CheY 0.38 AO356_06660 RNA methyltransferase low > 104
Pseudomonas sp. S08-1 0.31 OH686_08945 hypothetical protein 0.39 OH686_17460 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase low > 80
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_788 Response regulator 0.40 Pf1N1B4_868 tRNA:Cm32/Um32 methyltransferase low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_16190 chemotaxis protein CheY 0.40 AO353_15820 RNA methyltransferase low > 101
Marinobacter adhaerens HP15 0.30 HP15_3664 response regulator receiver modulated metal dependent phosphohydrolase 0.36 HP15_1484 RNA methyltransferase, TrmH family, group 1 low > 73
Shewanella oneidensis MR-1 0.28 SO2541 response regulator (NCBI ptt file) 0.35 SO2261 RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_05530 two-component system response regulator 0.30 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 62
Alteromonas macleodii MIT1002 0.25 MIT1002_03637 Hydrogenase transcriptional regulatory protein hupR1 0.33 MIT1002_02806 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ low > 70
Magnetospirillum magneticum AMB-1 0.14 AMB_RS14880 response regulator receiver modulated metal-depenent phosphohydrolase 0.21 AMB_RS10750 RNA methyltransferase low > 64
Rhodospirillum rubrum S1H 0.13 Rru_A0692 Response regulator receiver domain protein (CheY) (NCBI) 0.21 Rru_A0696 RNA methyltransferase TrmH, group 1 (NCBI) low > 58
Dickeya dianthicola ME23 0.12 DZA65_RS10630 response regulator 0.33 DZA65_RS16730 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 75
Dickeya dadantii 3937 0.12 DDA3937_RS10180 response regulator 0.33 DDA3937_RS15555 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 74
Dickeya dianthicola 67-19 0.12 HGI48_RS10210 response regulator 0.33 HGI48_RS15655 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ low > 71

Not shown: 0 genomes with orthologs for HSERO_RS18645 only; 61 genomes with orthologs for HSERO_RS08585 only